Command line tool to run batch jobs concurrently with ETL framework on AWS or other cloud computing resources
☆30Nov 14, 2018Updated 7 years ago
Alternatives and similar repositories for hotsub
Users that are interested in hotsub are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Data Profiling and Basic Quality Assessment tool, for the very beginning phase of your project.☆24May 27, 2024Updated 2 years ago
- Workflows written in common workflow language (CWL)☆14Dec 15, 2018Updated 7 years ago
- Common Workflow Language definition files for workflows introduced in DAT2☆11May 23, 2022Updated 4 years ago
- Accumulating container resource usage with workflow metadata☆19Mar 17, 2021Updated 5 years ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆21Nov 7, 2022Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- The minimum and most straightforward way to check if command exists and where the executable is, without spawning child_process.☆65Feb 14, 2026Updated 6 months ago
- Common Workflow Language tools and workflows by Pitagora-Network☆32Nov 8, 2022Updated 3 years ago
- IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.☆17May 5, 2026Updated 3 months ago
- paplot creates various dynamic and interactive reports for cancer genome analysis.☆26Feb 1, 2023Updated 3 years ago
- software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis☆31Jan 24, 2022Updated 4 years ago
- CWL (and input file) parser for Golang, used by github.com/otiai10/yacle☆22Mar 19, 2019Updated 7 years ago
- ☆11Apr 22, 2022Updated 4 years ago
- Multiplex Primer Design☆21Oct 30, 2020Updated 5 years ago
- Literate Computing for Reproducible Infrastructure - Hadoop Practice☆11Mar 5, 2026Updated 5 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- file command's magic pattern file for bioinformatics☆21Nov 25, 2015Updated 10 years ago
- ☆33Jul 24, 2026Updated 3 weeks ago
- Jupyter wrapper kernel that logs all cell outputs to files with history tracking☆10Aug 5, 2026Updated last week
- About Workflow related meetup☆14Dec 4, 2024Updated last year
- SPARQList: Repository server for working SPARQL snippets☆15Jun 16, 2026Updated 2 months ago
- Toolkit for extracting SVs from long sequences and benchmarking variant callers☆12Jan 10, 2017Updated 9 years ago
- IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split …☆16Aug 22, 2023Updated 2 years ago
- R packaged for Alpine Linux☆10Dec 10, 2017Updated 8 years ago
- DFAST Quality Control: Taxonomy and completeness check☆19Jun 17, 2026Updated 2 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- LAVA: Lightweight Assignment of Variant Alleles☆17Dec 27, 2017Updated 8 years ago
- D version of rbenv☆21Jan 19, 2019Updated 7 years ago
- Golang API backend powering a TodoList app☆33Oct 5, 2017Updated 8 years ago
- ☆37Feb 19, 2022Updated 4 years ago
- PathVisio - pathway editor, visualization and analysis software☆28Jan 22, 2025Updated last year
- ☆13Oct 14, 2017Updated 8 years ago
- a Graph database and R package for omic data integration☆19Oct 28, 2016Updated 9 years ago
- Docker container for Illumina bcl2fastq☆13Aug 7, 2024Updated 2 years ago
- Some simple scripts to ease management and local basecalling of millions of FAST5 files☆25Nov 25, 2017Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Many-Core Engine for Perl☆46Sep 9, 2025Updated 11 months ago
- CWL experimental grammar☆11Nov 16, 2025Updated 9 months ago
- Yet another LLM command line interface☆16Dec 9, 2024Updated last year
- A web application to view and share Common Workflow Language workflows☆51Updated this week
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Dec 8, 2020Updated 5 years ago
- R package to organise and standardise your genomic variant calls obtained with different callers.☆11Jul 15, 2019Updated 7 years ago
- Project for managing ML model and deploying ML module. It can deploy the Rekcurd service to Kubernetes cluster.☆27Dec 8, 2022Updated 3 years ago