qwerty239qwe / scTenifoldpyLinks
A python package implements scTenifoldnet and scTenifoldknk
☆24Updated 3 years ago
Alternatives and similar repositories for scTenifoldpy
Users that are interested in scTenifoldpy are comparing it to the libraries listed below
Sorting:
- inferring regulatory cellular dynamics☆56Updated 3 weeks ago
- ☆30Updated 2 months ago
- ☆45Updated last year
- R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.☆76Updated last month
- ☆49Updated 6 months ago
- Non-parametric density inference for single-cell analysis.☆72Updated 4 months ago
- ☆59Updated 3 months ago
- Multi-omic velocity inference☆111Updated 11 months ago
- SPROD: Spatial expression profiling de-noising☆37Updated 2 years ago
- Python implementation of Gene Trajectory☆28Updated last year
- R implementation of GeneTrajectory☆65Updated last year
- Code for scKINETICS (ISMB 2023)☆22Updated last year
- This repository contains all code used for the Human Lung Cell Atlas project.☆56Updated 2 years ago
- Predict RNA velocity through deep learning☆71Updated last year
- Single Cell Transcriptomics of 25 Human Organs to Create a Tabula Sapiens☆42Updated last month
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆65Updated 3 months ago
- SCODE : an efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation☆45Updated 5 years ago
- UniTVelo, Temporally Unified RNA Velocity for single cell trajectory inference☆26Updated 11 months ago
- Gene group activity utility functions for Scanpy☆92Updated 9 months ago
- ☆38Updated 3 months ago
- ☆41Updated 2 months ago
- ☆40Updated 2 years ago
- Single-cell Lung Cancer Atlas with 1.2M cells☆69Updated 9 months ago
- Collection of computational tools for cell-cell communication inference for single-cell and spatially resolved omics☆55Updated 4 months ago
- ☆17Updated 2 years ago
- ☆44Updated last year
- Unagi: Deep Generative Model for Deciphering Cellular Dynamics and In-Silico Drug Discovery in Complex Diseases.☆39Updated 3 months ago
- SIMBA: SIngle-cell eMBedding Along with features☆19Updated last year
- Repository to perform mapping of new datasets to the Human Lung Cell Atlas.☆20Updated 2 years ago
- ☆21Updated 6 months ago