Alternatives and similar repositories for oncoPredict

Users that are interested in oncoPredict are comparing it to the libraries listed below

• HaojiaWu / plot1cell
  A R package for advanced single cell data viz
  ☆68Updated 2 months ago
• Zaoqu-Liu / BioEnricher
  Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer
  ☆81Updated last year
• jumphone / FitDevo
  FitDevo: accurate inference of single-cell developmental potential using sample-specific gene weight
  ☆16Updated last year
• arc85 / singleseqgset
  Gene set enrichment analysis for single-cell RNAseq data
  ☆30Updated 2 years ago
• SiyuanHuang1 / cpplot
  Visualize the results of cell-cell communication analysis
  ☆24Updated 2 years ago
• navinlabcode / HumanBreastCellAtlas
  Repository for codes for the HBCA paper
  ☆38Updated 2 years ago
• jlaffy / infercna
  Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data
  ☆44Updated last year
• genecell / COSGR
  Accurate and fast cell marker gene identification with COSG
  ☆62Updated 2 years ago
• phillipnicol / scDist
  Robust identification of perturbed cell types in single-cell RNA-seq data
  ☆34Updated last week
• lmw123 / DISCOtoolkit
  ☆34Updated 3 weeks ago
• Coolgenome / iTALK
  ☆62Updated 6 years ago
• kerseviciute / aPEAR
  Enrichment Networks for Pathway Enrichment Analysis
  ☆60Updated 2 years ago
• dengchunyu / TIP
  The source code of web server TIP, including example data.
  ☆20Updated 6 years ago
• KChen-lab / METAFlux
  ☆77Updated last year
• youqiongye / CRC_scRNAseq
  ☆47Updated 3 years ago
• guokai8 / scGSVA
  scGSVA: Perform GSVA for single cell RNA seq
  ☆67Updated last year
• PaulingLiu / metaICB
  ☆22Updated 2 years ago
• xmc811 / Scillus
  R Package for Single-Cell Dataset Processing and Visualization
  ☆65Updated 4 years ago
• TheHumphreysLab / Mouse_DKD_Rx_Atlas
  ☆16Updated 3 years ago
• campbio / decontX
  Methods for decontamination of single cell data
  ☆50Updated 9 months ago
• califano-lab / PISCES
  R package for Protein activity analysis of single-cell RNAseq.
  ☆85Updated 2 years ago
• 123anjuan / HMA
  Human Muscle Ageing Cell Atlas
  ☆20Updated last year
• meta-cancer / scPLC
  Codes for the scPLC project
  ☆69Updated 2 years ago
• bio-Pixel / panVC
  ☆54Updated last year
• yingyonghui / CommPath
  R toolkit for inference and analysis of pathway-mediated cell-cell communication chain from single-cell transcriptomics
  ☆36Updated 8 months ago
• liziyie / scDVA
  An R shiny based tool used for single cell RNA-seq data visualization and analysis.
  ☆34Updated 4 years ago
• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆48Updated 6 months ago
• Moonerss / CIBERSORT
  ☆41Updated last year
• Dragonlongzhilin / RenalTumor
  Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma
  ☆79Updated last year
• compbioNJU / scPDAC
  R code used to analyze single cell PDAC data
  ☆41Updated last year