Alternatives and similar repositories for oncoPredict

Users that are interested in oncoPredict are comparing it to the libraries listed below

• HaojiaWu / plot1cell
  A R package for advanced single cell data viz
  ☆68Updated 3 months ago
• Zaoqu-Liu / BioEnricher
  Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer
  ☆81Updated last year
• jumphone / FitDevo
  FitDevo: accurate inference of single-cell developmental potential using sample-specific gene weight
  ☆16Updated last year
• genecell / COSGR
  Accurate and fast cell marker gene identification with COSG
  ☆62Updated 2 years ago
• lmw123 / DISCOtoolkit
  ☆34Updated last month
• xmc811 / Scillus
  R Package for Single-Cell Dataset Processing and Visualization
  ☆65Updated 4 years ago
• navinlabcode / HumanBreastCellAtlas
  Repository for codes for the HBCA paper
  ☆40Updated 2 years ago
• compbioNJU / scPDAC
  R code used to analyze single cell PDAC data
  ☆41Updated last year
• Coolgenome / iTALK
  ☆64Updated 6 years ago
• califano-lab / PISCES
  R package for Protein activity analysis of single-cell RNAseq.
  ☆85Updated 2 years ago
• KChen-lab / METAFlux
  ☆78Updated last year
• guokai8 / scGSVA
  scGSVA: Perform GSVA for single cell RNA seq
  ☆67Updated last year
• phillipnicol / scDist
  Robust identification of perturbed cell types in single-cell RNA-seq data
  ☆34Updated last month
• chloelulu / scMayoMap
  ☆25Updated 2 years ago
• liziyie / scDVA
  An R shiny based tool used for single cell RNA-seq data visualization and analysis.
  ☆34Updated 4 years ago
• meta-cancer / scPLC
  Codes for the scPLC project
  ☆71Updated 3 years ago
• SiyuanHuang1 / cpplot
  Visualize the results of cell-cell communication analysis
  ☆24Updated 2 years ago
• dengchunyu / TIP
  The source code of web server TIP, including example data.
  ☆20Updated 6 years ago
• bischofp / single_cell_lung_adenocarcinoma
  ☆32Updated 3 years ago
• arc85 / singleseqgset
  Gene set enrichment analysis for single-cell RNAseq data
  ☆30Updated 2 years ago
• bio-Pixel / panVC
  ☆55Updated last year
• 123anjuan / HMA
  Human Muscle Ageing Cell Atlas
  ☆20Updated last year
• jlaffy / infercna
  Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data
  ☆44Updated last year
• BioinformaticsFMRP / PanCanStem_Web
  ☆33Updated 4 years ago
• Xiaxy-XuLab / PanCAF
  ☆37Updated 3 years ago
• Single-Cell-Genomics-Group-CNAG-CRG / Tumor-Immune-Cell-Atlas
  Code repository for the Tumor Immune Cell Atlas (TICA) project
  ☆64Updated 3 years ago
• ShellyCoder / cellcall
  inferring cell-cell communication from scRNA-seq of ligand-receptor
  ☆84Updated 2 years ago
• LocasaleLab / Single-Cell-Metabolic-Landscape
  Pipeline for exploring metebolic heterogeneity at single-cell resolution
  ☆74Updated 5 years ago
• campbio / decontX
  Methods for decontamination of single cell data
  ☆52Updated 9 months ago
• Famingzhao / NEPAL_RawCode
  NEPAL is to calculate neuroendocrine (NE) risk score from bulk and single-cell transcriptomics of both human and mouse prostate cancer (P…
  ☆15Updated last year