Python package for stochastic simulations
☆18Apr 20, 2026Updated last week
Alternatives and similar repositories for cayenne
Users that are interested in cayenne are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- StochKit is an extensible tool for stochastic simulation tool with stochastic and multiscale algorithms.☆17Jun 9, 2020Updated 5 years ago
- Modeling toolkit for biochemical simulation☆84Jan 23, 2025Updated last year
- Identify long STRs, VNTRs, satellite DNA and other low-complexity regions in a genome☆91Jan 28, 2026Updated 3 months ago
- A manually curated lists of software, publications and other resources related to the analysis of HDX-MS data.☆11Dec 15, 2025Updated 4 months ago
- ☆11Aug 29, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Deprecated: please use GillesPy2☆12Oct 15, 2019Updated 6 years ago
- The Wetland DEM Ponding Model☆13Sep 22, 2021Updated 4 years ago
- The standalone version / cli-tool of SPOT-Contact-Single available for public use for research purposes.☆16Feb 1, 2024Updated 2 years ago
- Explore a state machine mechanism/notation for Simpy☆12May 24, 2022Updated 3 years ago
- Public code base for the Accelerated Molecular Discovery (AMD) platform☆11Nov 17, 2023Updated 2 years ago
- Flow routing using a hexagonal grid.☆11May 18, 2022Updated 3 years ago
- UCBShift is a program for predicting chemical shifts for backbone atoms and β-carbon of a protein in solution. It utilizes a machine lear…☆26Apr 9, 2026Updated 3 weeks ago
- Automatically exported from code.google.com/p/semanticchemistry☆10Mar 7, 2021Updated 5 years ago
- BlueBrain's recipe writer to parameterize structure and logic of a mouse whole-neocortex connectome☆10May 13, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- datatool: Dynamical Data Processing Tool for HPCs☆14Feb 20, 2026Updated 2 months ago
- PipeTaxon exposes the ncbi taxonomy database as a REST API.☆22Feb 15, 2023Updated 3 years ago
- Subset of AmberTools, with updates and modifications☆16Apr 22, 2026Updated last week
- Simulate short-reads datasets using probabilistic models☆11Jun 1, 2013Updated 12 years ago
- An Online Tool for the Real-Time Kinetic Analysis of Binding Events☆14Jul 13, 2025Updated 9 months ago
- ☆17Sep 4, 2022Updated 3 years ago
- ☆11Apr 25, 2021Updated 5 years ago
- Improved contact predictions using the recognition of protein like contact patterns.☆14May 18, 2018Updated 7 years ago
- Experimental package that eventually became PyMC3 (https://github.com/pymc-devs/pymc3)☆15Jan 22, 2017Updated 9 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- An oil land-spill and overland flow simulator for pipeline rupture events☆13Jun 10, 2021Updated 4 years ago
- Source code repository for OpenCMISS-Zinc☆17Aug 31, 2025Updated 8 months ago
- A package to create, visualize, and analysis PDB-derived pseudo-ensembles.☆10Jan 7, 2026Updated 3 months ago
- Lista de projetos python feitos no Rio de Janeiro☆12Jun 10, 2019Updated 6 years ago
- A pure-Python implementation of Basho's bitcask key-value store.☆12Jun 24, 2016Updated 9 years ago
- classification of higher-order structural variants from breakpoint data☆11Jan 8, 2018Updated 8 years ago
- Interactive NMR peak deconvolution☆18Sep 17, 2025Updated 7 months ago
- R package for CRHM pre- and post- processing☆13Apr 4, 2024Updated 2 years ago
- Advanced course on Reinforcement Learning.☆46Oct 28, 2025Updated 6 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Software to process, statistically analyse and visualise deep mutational scanning data☆14Updated this week
- Material do curso de text mining para cientistas sociais do CPDOC☆12May 8, 2025Updated 11 months ago
- Simulation, Bayesian inference and Bayesian model selection for chemical kinetics in Julia☆17Mar 28, 2017Updated 9 years ago
- Gillespie Stochastic Simulation Algorithm☆14Jun 29, 2013Updated 12 years ago
- COPASI is a software application for simulation and analysis of biochemical networks and their dynamics.☆125Mar 13, 2026Updated last month
- Tool to compute molecular Solvent Excluded Surface meshes on the GPU using CUDA☆15Jun 8, 2024Updated last year
- Bayesian Markov Model motif discovery tool version 2 - An expectation maximization algorithm for the de novo discovery of enriched motifs…☆16Feb 1, 2021Updated 5 years ago