csb-toolbox / CSBLinks
A Python framework for structural bioinformatics.
☆13Updated last year
Alternatives and similar repositories for CSB
Users that are interested in CSB are comparing it to the libraries listed below
Sorting:
- Vector graphics cartoons from protein structure☆47Updated 3 years ago
- ☆17Updated 4 months ago
- Enzyme models that take into account kinetics, allostery and thermodynamics☆27Updated 11 months ago
- Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019☆17Updated 6 years ago
- An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies☆33Updated 3 months ago
- A platform to do RNA science☆27Updated 4 years ago
- Template-based RNA secondary structure visualization☆26Updated 8 months ago
- ☆24Updated 2 years ago
- A Python package for mapping sequence aligned data onto protein structures☆35Updated 4 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆74Updated 2 weeks ago
- Chromosome polymer simulations and in silico capture experiments☆51Updated 2 weeks ago
- Comprehensive Python client for the Uniprot REST API☆50Updated last month
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 3 years ago
- A Python platform for Structural Bioinformatics☆57Updated 4 months ago
- Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.☆22Updated 6 years ago
- Software for the analysis and visualization of site-saturation mutagenesis experiments☆16Updated 2 years ago
- A high-fidelity E. coli RNA-seq compendium☆32Updated 4 years ago
- Evolutionary conservation estimation of residues or nucleotides☆46Updated 3 years ago
- Scripts to generate and analyze afdb clusters☆11Updated last year
- ☆14Updated 9 years ago
- Mutation effects predicted from sequence co-variation☆66Updated 7 years ago
- ☆16Updated 3 weeks ago
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆40Updated last month
- Analysis workflow for investigating the structural context of PTMs☆11Updated last year
- ☆11Updated last month
- ☆40Updated 3 years ago
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆42Updated this week
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆30Updated last year
- Protein structure comparison tools such as SSAP and SNAP☆64Updated last year