Alternatives and similar repositories for flowWorkspace:

Users that are interested in flowWorkspace are comparing it to the libraries listed below

• RGLab / CytoML
  A GatingML Interface for Cross Platform Cytometry Data Sharing
  ☆30Updated 2 weeks ago
• RGLab / flowCore
  Core flow cytometry infrastructure
  ☆46Updated 4 months ago
• RGLab / ggcyto
  Visualize Cytometry data with ggplot2
  ☆57Updated 10 months ago
• markrobinsonuzh / cytofWorkflow
  ☆15Updated 9 months ago
• Bioconductor / basilisk
  Clone of the Bioconductor repository for the basilisk package.
  ☆27Updated 2 months ago
• RGLab / openCyto
  A package that provides data analysis pipeline for flow cytometry.
  ☆78Updated 2 months ago
• stemangiola / tidySingleCellExperiment
  Brings SingleCellExperiment objects to the tidyverse
  ☆36Updated 3 weeks ago
• lmweber / diffcyt
  R package for differential discovery analyses in high-dimensional cytometry data
  ☆19Updated 10 months ago
• DillonHammill / CytoExploreR
  Interactive Cytometry Data Analysis
  ☆65Updated 2 months ago
• drisso / SingleCellExperiment
  Clone of the Bioconductor repository for the SingleCellExperiment package, see https://bioconductor.org/packages/devel/bioc/html/SingleCe…
  ☆68Updated 2 months ago
• epurdom / clusterExperiment
  R package of techniques for comparing clusterings of single-cell sequencing data
  ☆37Updated 8 months ago
• zdebruine / singlet
  Single-cell analysis with non-negative matrix factorization
  ☆42Updated 2 months ago
• GabrielHoffman / variancePartition
  Quantify and interpret divers of variation in multilevel gene expression experiments
  ☆60Updated last week
• LTLA / SingleCellThoughts
  Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.
  ☆44Updated 4 years ago
• milescsmith / ReductionWrappers
  R wrappers to connect Python dimensional reduction tools and single cell data objects (Seurat, SingleCellExperiment, etc...)
  ☆37Updated 2 weeks ago
• Shians / CellBench
  R package for benchmarking single cell analysis methods
  ☆30Updated last year
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆37Updated 2 weeks ago
• nolanlab / citrus
  Citrus Development Code
  ☆31Updated 9 months ago
• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆70Updated this week
• compbiomed / celda
  Bayesian Hierarchical Modeling for Clustering Single Cell Genomic Data
  ☆48Updated 5 years ago
• mikelove / deseq2_or_edger
  DESeq2 or edgeR
  ☆22Updated 8 years ago
• gjhunt / dtangle
  Cell type deconvolution from high-throughput gene expression profiling experiments.
  ☆31Updated 3 years ago
• alanocallaghan / scater
  Clone of the Bioconductor repository for the scater package.
  ☆95Updated 6 months ago
• waldronlab / cBioPortalData
  Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment
  ☆33Updated this week
• RGLab / cytoverse
  collections of tools for cytometry data analysis
  ☆13Updated 4 years ago
• SydneyBioX / scMerge
  Statistical approach for removing unwanted variation from multiple single-cell datasets
  ☆67Updated 9 months ago
• drisso / zinbwave
  Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave
  ☆43Updated 10 months ago
• kevinblighe / CorLevelPlot
  Visualise correlation results and test significancies of these
  ☆21Updated 4 years ago
• waldronlab / curatedTCGAData
  Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects
  ☆44Updated 2 months ago
• leekgroup / recount
  R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
  ☆40Updated last month