lorenzobonaguro / cyCONDORLinks
Flow cytometry analysis workflow. The aim of this project is to provide an intuitive workflow for the analysis of high-dimensionality cytometry data in R.
☆19Updated this week
Alternatives and similar repositories for cyCONDOR
Users that are interested in cyCONDOR are comparing it to the libraries listed below
Sorting:
- Using self-organizing maps for visualization and interpretation of cytometry data☆28Updated 3 months ago
- Cell type pipes for R☆51Updated last year
- Annotated multivariate observation data in R☆47Updated 3 weeks ago
- AnnData interoperability in R☆82Updated last week
- Latent Embedding Multivariate Regression☆91Updated 7 months ago
- Framework for sensitive DE testing (using neighbourhoods)☆70Updated 11 months ago
- marker-based purification of cell types from single-cell RNA-seq datasets☆112Updated 2 months ago
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆92Updated 6 months ago
- Clone of the Bioconductor repository for the scran package.☆42Updated 9 months ago
- An R package for handling and analysing imaging mass cytometry data☆26Updated last week
- R Package for Single-Cell Dataset Processing and Visualization☆63Updated 3 years ago
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- cytofkit: an integrated flow/mass cytometry data analysis pipeline☆58Updated 4 years ago
- scGSVA: Perform GSVA for single cell RNA seq☆61Updated 7 months ago
- R library to normalize cytometry data☆37Updated 2 months ago
- An R-based interface for loom files☆66Updated 4 years ago
- Toolkit for Single-Cell Velocity☆56Updated 5 months ago
- characterizing spatial gene expression heterogeneity in spatially resolved single-cell transcriptomics data with nonuniform cellular dens…☆75Updated 3 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆66Updated 8 months ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆37Updated 2 years ago
- Cytometry dATa anALYsis Tools☆68Updated last month
- Gene regulatory network containing signed transcription factor-target gene interactions☆82Updated 3 weeks ago
- An r package that works as a wrapper to homologene☆46Updated last year
- R package for semi-supervised single-cell data integration☆82Updated last month
- R package for decontaminating the spot swapping effect and recovering true expression in spatial transcriptomics data☆32Updated last year
- R package for specialised analysis of single cell data☆38Updated 2 years ago
- R package for pathway analysis in scRNA-seq data☆73Updated 10 months ago
- ☆16Updated last year
- Normalize CITEseq Data☆66Updated 2 months ago
- ☆49Updated 7 years ago