Bioinformatics Pipeline
☆12Oct 7, 2022Updated 3 years ago
Alternatives and similar repositories for bioinformatics_pipeline
Users that are interested in bioinformatics_pipeline are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Metagenomic AnalySis with QUantitative pipEline☆12Apr 24, 2019Updated 6 years ago
- Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUS☆10Jul 20, 2017Updated 8 years ago
- An introductory course to eQTL analysis.☆10Jul 11, 2025Updated 9 months ago
- single cell and bulk RNASeq analysis scripts☆14Jan 13, 2022Updated 4 years ago
- A set of processes/pipelines for bioinformatics☆14Apr 11, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Code for the paper on the ICR immune signatures and prognostic significance pan-cancer (TCGA)☆10Jul 22, 2020Updated 5 years ago
- Handy tools for Microbiome analysis in R☆18May 22, 2019Updated 6 years ago
- A Nextflow Genome-Wide Association Study (GWAS) Pipeline☆36Jun 26, 2025Updated 9 months ago
- This is a general (somewhat comprehensive) description of the LNG GWAS pipeline which can be used to guide researchers on how-to run a GW…☆43May 18, 2022Updated 3 years ago
- bioinformatics R test code☆14Mar 29, 2026Updated 3 weeks ago
- eQTLHap: a comprehensive eQTL analysis tool.☆11Apr 15, 2021Updated 5 years ago
- Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor☆27Updated this week
- A suite of tools for processing genotype data. Includes calling genotypes from .idat to plink (ped), sample/case-control variant QC steps…☆15Feb 5, 2026Updated 2 months ago
- calculate multiple MD5 using multiple threads☆13Apr 16, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Codes for Vmap1.1 and Vmap3☆11Jan 5, 2026Updated 3 months ago
- ☆18Oct 4, 2023Updated 2 years ago
- A tool to plot significant regions of GWAS☆29Jan 27, 2023Updated 3 years ago
- De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk☆10Aug 2, 2023Updated 2 years ago
- ☆12Apr 10, 2021Updated 5 years ago
- ☆21Mar 21, 2021Updated 5 years ago
- Calculating and Visualizing ROC and PR Curves Across Multi-Class Classifications☆34Feb 10, 2021Updated 5 years ago
- Genome-wide association studies (GWAS) for ordered categorical phenotypes☆23Updated this week
- A powerful Perl module for simulating the genome digestions by restriction enzymes☆14Sep 10, 2024Updated last year
- Deploy open-source AI quickly and easily - Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- R package for "Multi-tissue Transcriptome-Wide Association Studies (MTWAS)"☆17Oct 7, 2025Updated 6 months ago
- PaNeV: an R package for a pathway-based network visualization☆10Aug 25, 2025Updated 7 months ago
- ☆16May 10, 2023Updated 2 years ago
- Two or three subtypes of high grade serous ovarian cancer subtypes fit data from different populations better than four☆12Oct 10, 2018Updated 7 years ago
- The repo for LFQ-Analyst☆30Aug 7, 2024Updated last year
- ☆18Apr 18, 2024Updated 2 years ago
- ☆21Nov 15, 2024Updated last year
- Scripts and Data associated with our publication on genomic signatures to discriminate LUAD and LUSC lung cancer types using TCGA data☆11Mar 2, 2022Updated 4 years ago
- GCModeller: genomics CAD(Computer Assistant Design) Modeller system in .NET language☆37Updated this week
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Plotly BioVisualization 🎯 Interactive Needle and Manhattan Plots & Alignment Viewer☆11Feb 28, 2020Updated 6 years ago
- ☆11Mar 16, 2022Updated 4 years ago
- cgat-apps repository☆35Apr 9, 2025Updated last year
- 天津医科大学，生物医学工程与技术学院，《生物信息学》 课程资料☆43Jun 2, 2023Updated 2 years ago
- Event page: https://www.csc.fi/web/training/-/single-cell-rnaseq-r-2018☆13Sep 24, 2018Updated 7 years ago
- Scripts for NGS processing☆16Sep 6, 2017Updated 8 years ago
- Design gene specific KASP and CAPS/dCAPS primers for any species☆18Sep 19, 2022Updated 3 years ago