Alternatives and similar repositories for dna_lstm:

Users that are interested in dna_lstm are comparing it to the libraries listed below

• cschin / DCNet
  DCNet — Denoising (DNA) Sequence With a LSTM-RNN and PyTorch & Neural DBG
  ☆69Updated 6 years ago
• gifford-lab / Keras-genomics
  Perform hyper-parameter tuning, training, testing and prediction with Keras
  ☆44Updated 6 years ago
• UofLBioinformatics / circDeep
  End-to-End learning framework for circular RNA classification from other long non-coding RNA using multimodal deep learning
  ☆23Updated 5 years ago
• tariqul-islam / DNA-Sequence-Classification-using-CNN
  Recreation of the DNA Sequence Classification Paper
  ☆13Updated 8 years ago
• kundajelab / dfim
  Deep Feature Interaction Maps (DFIM)
  ☆53Updated 5 years ago
• hendrixlab / mRNN
  mRNN is an implementation of a Gated Recurrent Unit (GRU) network for classification of transcripts as either coding or noncoding.
  ☆19Updated 6 years ago
• budach / pysster
  pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks
  ☆86Updated 5 years ago
• rezacsedu / Neural-Ensemble-Method-for-Cancer-Prediction
  A Snapshot Neural Ensemble Method for Cancer Type Prediction Based on Copy Number Variations
  ☆19Updated 2 years ago
• QData / DeepChrome
  Bioinformatics16: DeepChrome: Deep-learning for predicting gene expression from histone modifications
  ☆62Updated 3 years ago
• etirouthier / keras_dna
  ☆23Updated 3 years ago
• GuipengLi / SharePathway
  a python package for KEGG pathway enrichment analysis with multiple gene lists.
  ☆35Updated 7 years ago
• gagneurlab / concise
  Concise: Keras extension for regulatory genomics
  ☆35Updated 2 years ago
• wanglf19 / scCaps
  An interpretable deep-learning architecture of capsule networks for identifying cellular-type gene expression programs from single-cell R…
  ☆26Updated 4 years ago
• xiaoyeye / CNNC
  covolutional neural network based coexpression analysis
  ☆76Updated 4 years ago
• broadinstitute / dsde-deep-learning
  DSDE Deep Learning Club
  ☆40Updated 5 years ago
• mickaelleclercq / BioDiscML
  Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data
  ☆28Updated 9 months ago
• jimmyyhwu / deepsea
  DeepSEA in TensorFlow
  ☆29Updated 7 years ago
• tlatkowski / deep-learning-gene-expression
  Deep learning methods for feature selection in gene expression autism data.
  ☆35Updated 2 years ago
• BIMSBbioinfo / maui
  Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit
  ☆49Updated last year
• kipoi / kipoiseq
  Standard set of data-loaders for training and making predictions for DNA sequence-based models.
  ☆81Updated 4 months ago
• luslab / arshamg-scrnaseq-wgan
  Wasserstein Generative Adversarial Network for analysing scRNAseq data
  ☆34Updated 4 years ago
• NeuroCSUT / ViraMiner
  CNN based classifier for detecting viral sequences among metagenomic contigs
  ☆33Updated 4 years ago
• paubellot / DL-Biobank
  Can deep learning improve genomic prediction of complex human traits? by Pau Bellot, Gustavo de los Campos, Miguel Pérez-Enciso, Genetics
  ☆22Updated 5 months ago
• maximilianh / crisporPaper
  Code for the CRISPOR article, all data and code to create figures and analysis
  ☆41Updated 8 years ago
• mila-iqia / gene-graph-conv
  Towards Gene Expression Convolutions using Gene Interaction Graphs
  ☆74Updated 3 years ago
• kundajelab / genomelake
  Simple and efficient access to genomic data for deep learning models.
  ☆43Updated 5 years ago
• KHP-Informatics / DNAscan
  DNAscan is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring ve…
  ☆43Updated 2 years ago
• dhbradshaw / ml-for-genomics
  Lists open source machine learning projects solving genomic or molecular biology problems.
  ☆28Updated 7 years ago
• realbigws / cwDTW
  Continuous Wavelet Dynamic Time Warping for unbalanced global mapping of two signals
  ☆19Updated 6 years ago
• cstoeckert / iterativeWGCNA
  Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.
  ☆61Updated 3 years ago