Alternatives and similar repositories for deep_learning_DNA

Users that are interested in deep_learning_DNA are comparing it to the libraries listed below

• ThierryMondeel / Systems_Biology_FBA_tutorial
  Python, modeling and Flux balance analysis tutorials for the undergraduate Systems Biology course in Amsterdam
  ☆14Updated 6 years ago
• mickaelleclercq / BioDiscML
  Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data
  ☆31Updated last month
• Ashish438 / Python-for-Bioinformatics
  Python for Bioinformatics consist of a variety of python programmes,frequently used by bioinformaticians while handling biological data e…
  ☆43Updated last year
• fayjustin / computational_biology
  course material
  ☆132Updated 2 years ago
• BIMSBbioinfo / janggu
  Deep learning infrastructure for genomics
  ☆258Updated 3 years ago
• evanpeikon / Python_Fundamentals_Biology
  Python Fundamentals for Biologists
  ☆38Updated 9 months ago
• zaneveld / full_spectrum_bioinformatics
  An open-access bioinformatics text
  ☆116Updated 3 months ago
• bm2-lab / DeepCRISPR
  ☆66Updated 2 years ago
• boscoh / uniprot
  retrieve protein sequence identifiers and metadata from http://uniprot.org
  ☆68Updated 3 years ago
• RTH-tools / crispron
  CRISPR Cas9 ontarget prediction software
  ☆27Updated 6 months ago
• sequana / sequana
  Sequana: a set of Snakemake NGS pipelines
  ☆146Updated last month
• SysBioChalmers / RAVEN
  The RAVEN Toolbox for genome scale model reconstruction, curation and analysis.
  ☆113Updated 3 months ago
• BioSystemsUM / troppo
  Reconstruction algorithms for Python
  ☆25Updated 10 months ago
• etirouthier / keras_dna
  ☆24Updated 4 years ago
• miguelfrocha / BioinformaticsAlgorithmsBook
  Repository for code of the book "Bioinformatics Algorithms" by Miguel Rocha and Pedro Ferreira. Editor: Elsevier
  ☆66Updated 6 years ago
• jiujiezz / deephlapan
  A deep learning approach for predicting high-confidence neoantigens by considering both the presentation possibilities of mutant peptides…
  ☆44Updated 2 years ago
• chris-rands / biopython-coronavirus
  Biopython Jupyter Notebook tutorial to characterize a small genome
  ☆102Updated 5 years ago
• kipoi / models
  Model zoo for genomics
  ☆168Updated last year
• budach / pysster
  pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks
  ☆86Updated 5 years ago
• felicityallen / JACKS
  Analysis package for processing counts from genome-wide CRISPR/Cas9 screens
  ☆14Updated 4 years ago
• ebi-jdispatcher / webservice-clients
  A collection of Web Service Clients to consume EBI's Job Dispatcher tools via REST APIs
  ☆54Updated last year
• nh2tran / DeepNovo-DIA
  De novo peptide sequencing for DDA and DIA by deep learning
  ☆36Updated 4 years ago
• SegataLab / metaml
  ☆33Updated last year
• pydna-group / pydna
  Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…
  ☆194Updated last week
• ncbi / clinvar
  ClinVar aggregates information about genomic variation and its relationship to human health. Contact us at 'clinvar@ncbi.nlm.nih.gov…
  ☆81Updated last month
• lwgray / pyEntrezId
  Converts Ensembl, Uniprot, and HGNC IDs to Entrez Gene Id
  ☆46Updated 2 years ago
• Global-Biofoundries-Alliance / SynBioPython
  General low-level API
  ☆50Updated 3 years ago
• google / deepsomatic
  DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal and tumor-only sequencing …
  ☆180Updated 3 months ago
• FenyoLab / PGx
  PGx supports proteogenomic intregration of mass spectrometry (MS) proteomics data with next generation sequencing (NGS) by mapping identi…
  ☆10Updated last year
• Roestlab / PythonProteomics
  A collection of available Python tools for Proteomics analysis
  ☆59Updated 6 years ago