onceupon / deep_learning_DNA
classifying human DNA sequence and random ATCG sequences, using keras CNN
☆23Updated 7 years ago
Alternatives and similar repositories for deep_learning_DNA
Users that are interested in deep_learning_DNA are comparing it to the libraries listed below
Sorting:
- Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data☆30Updated last year
- ☆29Updated 8 months ago
- Python, modeling and Flux balance analysis tutorials for the undergraduate Systems Biology course in Amsterdam☆13Updated 5 years ago
- Interactive tutorials for using scikit-bio in biological research☆25Updated 10 months ago
- ☆23Updated 4 years ago
- Code depository for papers☆24Updated 5 months ago
- Explore biomolecular pathways in Reactome from the command-line or a Python script☆23Updated 7 months ago
- Analyze NGS data for CRISPR (or any engineered endonuclease) activity and screen for clones. Screen for NHEJ or multiple HDR events concu…☆26Updated last year
- HemTools: a collection of NGS pipelines and bioinformatic analyses☆70Updated last month
- Similarity networks of biosynthetic gene clusters☆110Updated last week
- Analysis package for processing counts from genome-wide CRISPR/Cas9 screens☆14Updated 4 years ago
- Python for Bioinformatics consist of a variety of python programmes,frequently used by bioinformaticians while handling biological data e…☆44Updated 11 months ago
- This repository contains Jupyter Notebooks containing GATK Best Practices Workflows☆26Updated 5 years ago
- A richly featured desktop platform for data analysis of bioinformatics. Especially, for quick sequence annotation and mutation analysis o…☆28Updated 6 months ago
- Fast and flexible ORF finder☆69Updated 3 years ago
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Updated 6 years ago
- A curated list of awesome resources, papers, datasets, and tools related to Genomic LLMs. This repository aims to provide a comprehensive…☆12Updated 9 months ago
- High-quality circular representations of taxonomic and phylogenetic trees☆96Updated 9 months ago
- Alternative splicing resource☆54Updated 7 years ago
- A set of Shiny apps to provide interactive enrichment analysis and exploration of results.☆28Updated last month
- List of computational resources for analyzing microbial sequencing data.☆68Updated last year
- Converts Ensembl, Uniprot, and HGNC IDs to Entrez Gene Id☆45Updated last year
- Open source short linear motif discovery and sequence analysis☆24Updated 8 months ago
- Docker for CRISPR Library Designer | https://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-0915-2☆20Updated 2 years ago
- ☆32Updated 2 years ago
- A Python code for generating k-mer features for a set of DNA/ genomic sequences.☆28Updated 9 months ago
- CNN based classifier for detecting viral sequences among metagenomic contigs☆33Updated 4 years ago
- SEER, reimplemented in python 🐍🔮☆121Updated 6 months ago
- pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks☆86Updated 5 years ago
- A curated collection of free resources to help the aspiring computational biologist learn about the R programming language.☆22Updated 5 months ago