Moeinh77 / Virus-DNA-classification-BERTView external linksLinks
Classification of 6 viruses including covid-19 based on their DNA sequences using Transformers
☆18Apr 18, 2023Updated 2 years ago
Alternatives and similar repositories for Virus-DNA-classification-BERT
Users that are interested in Virus-DNA-classification-BERT are comparing it to the libraries listed below
Sorting:
- in silico plasmid extraction☆13Sep 18, 2017Updated 8 years ago
- DeepSEA implements in PyTorch☆25Jun 5, 2019Updated 6 years ago
- classifying human DNA sequence and random ATCG sequences, using keras CNN☆23Jul 8, 2017Updated 8 years ago
- Given a reference, PhaME extracts SNPs from complete genomes, draft genomes and/or reads. Uses SNP multiple sequence alignment to constr…☆33Nov 28, 2023Updated 2 years ago
- Python routines for generating simple models of DNA☆13Oct 19, 2025Updated 3 months ago
- A Deepfake detector based on hybrid EfficientNet CNN and Vision Transformer archietcture. The model is explainable by rendering a heatma…☆15Mar 16, 2022Updated 3 years ago
- LSTM for binary DNA sequence classification☆30Jun 21, 2022Updated 3 years ago
- 在NLP领域中一些任务的Demo☆13Sep 11, 2023Updated 2 years ago
- Population Reference Graphs for the HLA and MHC.☆35Dec 18, 2018Updated 7 years ago
- Genetic Association Analysis Under Complex Survey Sampling☆13Nov 13, 2019Updated 6 years ago
- Repository for transferGWAS, a deep learning method for performing genome-wide association studies on full medical imaging data.☆14Jul 29, 2022Updated 3 years ago
- MetaPORE – Chiu Laboratory, University of California, San Francisco☆12Nov 4, 2015Updated 10 years ago
- Assemble the Genome in a Bottle sequencing data☆10Aug 4, 2017Updated 8 years ago
- Create pegboards with beads (Like Hama)☆10Aug 23, 2016Updated 9 years ago
- A Demultiplexing Tool for Illumina Sequencers☆10Sep 27, 2016Updated 9 years ago
- ☆11Mar 10, 2024Updated last year
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆11Jul 8, 2025Updated 7 months ago
- Scripts for creating a Kraken database from the Comprehensive Antibiotic Resistance Database☆10Dec 16, 2016Updated 9 years ago
- A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis☆10Jan 30, 2016Updated 10 years ago
- km : a software for RNA-seq investigation using k-mer decomposition☆10Apr 8, 2025Updated 10 months ago
- Parametric sweep of simulated microbial communities and metagenomic sequencing.☆11Jul 15, 2022Updated 3 years ago
- A tool to examine duplicate read characteristics in a BAM file☆12Dec 8, 2017Updated 8 years ago
- Pipeline for Evaluating Prokaryotic References☆11Sep 16, 2016Updated 9 years ago
- Masks recombinant regions in an alignment based on ClonalFrameML output☆10May 18, 2018Updated 7 years ago
- Scripts and documentations on the MCSC decontamination method☆10Jun 13, 2023Updated 2 years ago
- CPANG19 - Computational PANGenomics (2019)☆12May 7, 2020Updated 5 years ago
- Rheumatoid Arthritis project. single cell RNA sequencing data.☆15May 31, 2021Updated 4 years ago
- Collection of R scripts for SARS-CoV-2 (variant) analyses☆12Mar 2, 2023Updated 2 years ago
- ☆13Jul 12, 2022Updated 3 years ago
- A repository dedicated to learning about ChatGPT training techniques and related knowledge. Contains study notes, code snippets, and reso…☆12Dec 14, 2024Updated last year
- This streaming simulator workload continuously generates fake patient records and writes to Google Cloud FHIR Store.☆11May 25, 2022Updated 3 years ago
- LLM for genomic☆14Feb 23, 2024Updated last year
- Formats Roary output for viewing in FriPan☆11May 23, 2018Updated 7 years ago
- Prediction pipeline to generate prognosis predictors for Ebola Virus Disease☆12Feb 22, 2016Updated 9 years ago
- Software for Nanopore Analysis☆10Mar 14, 2018Updated 7 years ago
- ☆12Feb 19, 2017Updated 8 years ago
- pipelines to process scRNA-seq data☆12Jan 11, 2021Updated 5 years ago
- For QMUL's Genome Bioinformatics MSc module BIO721P & SIB's Spring school in bioinfo & population genomics☆13Oct 1, 2024Updated last year
- Manages tweets about food poisoning in Chicago and presents Open311 form for reporting incidents.☆29Jan 25, 2017Updated 9 years ago