Alternatives and similar repositories for geneSurv

Users that are interested in geneSurv are comparing it to the libraries listed below

• RTCGA / RTCGA
  Download, integration and visualizations of the variety & volume of TCGA data.
  ☆51Updated 2 years ago
• waldronlab / curatedTCGAData
  Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects
  ☆43Updated 2 months ago
• jasdumas / shinyGEO
  Gene Expression Omnibus Analysis with Shiny
  ☆40Updated 3 years ago
• hakyimlab / ukbrest
  ukbREST: efficient and streamlined data access for reproducible research of large biobanks
  ☆41Updated 4 years ago
• mararie / lionessR
  Single sample network reconstruction in R
  ☆23Updated 5 years ago
• MSKCC-Epi-Bio / gnomeR
  Package to wrangle and visualize genomic data in R
  ☆26Updated 11 months ago
• crj32 / M3C
  Monte Carlo Reference-based Consensus Clustering
  ☆36Updated 5 years ago
• cBioPortal / 2020-cbioportal-r-workshop
  Workshop materials for cBioPortal Webinar 5: API & R Client
  ☆19Updated 5 years ago
• cmap / morpheus.R
  R interface to morpheus.js heatmap widget
  ☆38Updated 4 years ago
• andreaskapou / scMET
  Bayesian modelling of DNA methylation heterogeneity at single-cell resolution
  ☆23Updated last year
• bioconnector / workshops
  Bioconnector Workshops
  ☆32Updated 6 years ago
• kevinblighe / RegParallel
  Standard regression functions in R enabled for parallel processing over large data-frames.
  ☆39Updated 2 years ago
• laderast / bash_for_dnanexus
  Beginning of a textbook for shell skills for bioinformatics
  ☆11Updated last year
• lgatto / tidies
  A Grammar of Data Manipulation for Omics Data
  ☆21Updated 5 years ago
• arorarshi / survClust
  An outcome weighted supervised clustering algorithm, designed to classify patients according to their molecular as well as time-event or …
  ☆16Updated last year
• CRI-iAtlas / shiny-iatlas
  An interactive web portal for exploring immuno-oncology data. This repo now superseded by iatlas-app
  ☆49Updated 4 years ago
• omicsCore / SEQprocess
  SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package
  ☆17Updated 5 years ago
• angy89 / RobustSparseCorrelation
  This is the R implementation of a robust correlation matrix estimator usefull in case of high-dimensional data to remove the bias. It al…
  ☆13Updated 6 years ago
• pkimes / sigclust2
  tests for statistical significance of clustering
  ☆38Updated 6 years ago
• ocbe-uio / survomics
  Tutorial on survival modeling with omics data
  ☆11Updated 6 months ago
• federicomarini / pcaExplorer
  pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
  ☆56Updated 5 months ago
• waldronlab / cBioPortalData
  Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment
  ☆33Updated 2 months ago
• PhilBoileau / scPCA
  A toolbox for sparse contrastive principal component analysis
  ☆12Updated 8 months ago
• stephenslab / fastTopics
  Fast algorithms for fitting topic models and non-negative matrix factorizations to count data.
  ☆81Updated 3 months ago
• lcolladotor / biocthis
  Automate package and project setup for Bioconductor packages
  ☆54Updated 6 months ago
• kmezhoud / bioCancer
  A Shiny App for Interactive Multi-OMICS Cancer Data Visualization and analysis
  ☆21Updated last year
• karissawhiting / cbioportalR
  R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases
  ☆23Updated 10 months ago
• Bioconductor / bioc-run
  Helper script for bioconductor/bioconductor_docker
  ☆13Updated 6 months ago
• Bohdan-Khomtchouk / shinyheatmap
  Web application for enormous biological heatmaps
  ☆66Updated 5 years ago
• seandavi / wdlRunR
  Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources
  ☆34Updated 3 years ago