A Landscape Genomic Analysis Toolkit in R
☆23Aug 28, 2026Updated this week
Alternatives and similar repositories for algatr
Users that are interested in algatr are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- association analysis of distance matrices using gradient forest approach☆16Jul 1, 2026Updated last month
- Population Genomics in R workshop☆13Mar 24, 2024Updated 2 years ago
- Spatio-temporal trends in habitat suitability from ecological niche models☆15Feb 4, 2026Updated 6 months ago
- Dispersal simulations based on ecological niches☆16Dec 7, 2023Updated 2 years ago
- A framework for simulation-based inference in evolutionary biology☆28Jan 13, 2026Updated 7 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆13Mar 8, 2024Updated 2 years ago
- R package to create packed image mosaics (inspired by https://github.com/qnzhou/Mosaic)☆14Jun 28, 2023Updated 3 years ago
- Introductory lesson to generate range maps for butterfly-host plant interactions and predict distributional shifts using publicly availab…☆18Aug 8, 2024Updated 2 years ago
- polysat 1.7: tools for polyploid microsatellite analysis☆12Dec 20, 2024Updated last year
- An R package for the calculation of taxonomic, phenotypic and phylogenetic metrics across grid cells.☆17Aug 20, 2025Updated last year
- Genetic Algorithm for Demographic Model Analysis☆57Feb 3, 2026Updated 6 months ago
- Teaching Material for a Machine Learning course with Keras and Tensorflow in R☆18Jul 3, 2026Updated last month
- quickLD, a large-scale, long-range Linkage Disequilibrium analysis tool utilizing parallel CPU, GPU or heterogeneous computing.☆10Jun 10, 2022Updated 4 years ago
- Preparation of species occurrences and distribution data for the use in phylogenetic analyses. SpeciesgeocodeR is built for data explorat…☆23Aug 31, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Tutorials for bioinformatics and data analysis related to landscape genomics☆31Jan 19, 2019Updated 7 years ago
- ☆38Dec 28, 2021Updated 4 years ago
- Forest Fuels from Brown's Transects☆11Dec 14, 2018Updated 7 years ago
- Wrapper function for 'inlabru' for modeling species distribution models from disparate datasets.☆29Aug 11, 2026Updated 2 weeks ago
- Pipeline to analyze eDNA metabarcoding samples (PE and SE, demultiplexed, multiplexed)☆12Jul 6, 2022Updated 4 years ago
- 📦 R package to compute functional diversity indices efficiently☆44Aug 20, 2026Updated last week
- Tools for Modeling Niches and Distributions of Species☆30Aug 19, 2025Updated last year
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆46Jul 25, 2025Updated last year
- Package to plot phylogenies with custom shapes☆24Apr 17, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Cartography of Genomic Interactions Enables Deep Analysis of Single-Cell Expression Data (Nature Communications, 2023)☆19May 27, 2024Updated 2 years ago
- Creates a simple OTU table from Kraken2 report.☆13Oct 15, 2024Updated last year
- small scripts, functions or bits of code for parsing genomic data☆14Sep 24, 2022Updated 3 years ago
- R-Ladies Dublin meetups slides and code☆12Feb 15, 2021Updated 5 years ago
- faster haplotype-based admixture inference and dating software☆12Nov 25, 2025Updated 9 months ago
- ☆14Apr 14, 2026Updated 4 months ago
- Here we produced an individual tree dataset including tree locations, height, crown area, crown volume, and biomass over the entire New Y…☆18Jan 28, 2023Updated 3 years ago
- This repository contains the latest version of the HomeRange data and R package.☆12Apr 17, 2025Updated last year
- ☆47Nov 6, 2022Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- filtering SNPs based on LD and HWE status☆10Jul 3, 2023Updated 3 years ago
- A Python3 script for removal of outlier sequences from a multiple sequence alignment (FASTA format).☆10Jul 6, 2026Updated last month
- A generalised, dynamic DNA reference library for metabarcoding of fishes☆19Aug 20, 2026Updated last week
- Workshop on Genomics - Genomics Adventure☆47Jan 22, 2026Updated 7 months ago
- R package to find species interactions from co-occurrence data☆16Aug 19, 2026Updated last week
- Quarto extension for an opinionated letter template with customized letter head☆11Jun 5, 2024Updated 2 years ago
- Shiny app for making and annotating Volcano plots☆25Dec 12, 2025Updated 8 months ago