A Landscape Genomic Analysis Toolkit in R
☆22Nov 18, 2025Updated 3 months ago
Alternatives and similar repositories for algatr
Users that are interested in algatr are comparing it to the libraries listed below
Sorting:
- association analysis of distance matrices using gradient forest approach☆16Oct 7, 2025Updated 4 months ago
- Spatio-temporal trends in habitat suitability from ecological niche models☆14Feb 4, 2026Updated 3 weeks ago
- Dispersal simulations based on ecological niches☆16Dec 7, 2023Updated 2 years ago
- Population Genomics in R workshop☆12Mar 24, 2024Updated last year
- ☆12Mar 8, 2024Updated last year
- R package to create packed image mosaics (inspired by https://github.com/qnzhou/Mosaic)☆14Jun 28, 2023Updated 2 years ago
- A framework for simulation-based inference in evolutionary biology☆28Jan 13, 2026Updated last month
- An R package for the calculation of taxonomic, phenotypic and phylogenetic metrics across grid cells.☆16Aug 20, 2025Updated 6 months ago
- Introductory lesson to generate range maps for butterfly-host plant interactions and predict distributional shifts using publicly availab…☆18Aug 8, 2024Updated last year
- Teaching Material for a Machine Learning course with Keras and Tensorflow in R☆18May 9, 2025Updated 9 months ago
- Preparation of species occurrences and distribution data for the use in phylogenetic analyses. SpeciesgeocodeR is built for data explorat…☆23Aug 31, 2023Updated 2 years ago
- Genetic Algorithm for Demographic Model Analysis☆54Feb 3, 2026Updated 3 weeks ago
- Tools for Modeling Niches and Distributions of Species☆26Aug 19, 2025Updated 6 months ago
- Wrapper function for 'inlabru' for modeling species distribution models from disparate datasets.☆27Jan 30, 2026Updated last month
- Package to plot phylogenies with custom shapes☆24Apr 17, 2024Updated last year
- Tutorials for bioinformatics and data analysis related to landscape genomics☆30Jan 19, 2019Updated 7 years ago
- ☆14Feb 18, 2026Updated last week
- Machuruku☆32Jan 20, 2025Updated last year
- ☆35Dec 28, 2021Updated 4 years ago
- This repository contains the latest version of the HomeRange data and R package.☆11Apr 17, 2025Updated 10 months ago
- 📦 R package to compute functional diversity indices efficiently☆40Sep 29, 2025Updated 5 months ago
- R-Ladies Dublin meetups slides and code☆12Feb 15, 2021Updated 5 years ago
- Bayesian estimation of the evolutionary rate matrix.☆10Dec 8, 2025Updated 2 months ago
- A Python3 script for removal of outlier sequences from a multiple sequence alignment (FASTA format).☆10Jan 26, 2025Updated last year
- polysat 1.7: tools for polyploid microsatellite analysis☆12Dec 20, 2024Updated last year
- Detects and blacklists paralog RAD loci analyzed in Stacks or ipyrad, based on the McKinney 2017 method (doi:10.1111/1755-0998.12613)☆10Sep 4, 2019Updated 6 years ago
- This package aims to generate phylogenetic trees for a list of species of plants or animals, based on an existent backbone phylogeny.☆13Nov 20, 2024Updated last year
- ☆44Nov 6, 2022Updated 3 years ago
- filtering SNPs based on LD and HWE status☆10Jul 3, 2023Updated 2 years ago
- Quarto extension for an opinionated letter template with customized letter head☆11Jun 5, 2024Updated last year
- Scripts in R for Landscape Genomics Analyses v.2☆10Feb 17, 2023Updated 3 years ago
- An introduction to GAM(M)s☆10Dec 14, 2022Updated 3 years ago
- Workshop on Genomics - Genomics Adventure☆47Jan 22, 2026Updated last month
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆44Jul 25, 2025Updated 7 months ago
- scripts for the project of seven thaliana genomes assembly☆42May 22, 2021Updated 4 years ago
- Newick tree processing☆13Feb 22, 2026Updated last week
- Using Digitized Collections-Based Data in Research: Applications for Ecology, Phylogenetics, and Biogeography Botany 2025.☆14Aug 7, 2025Updated 6 months ago
- phylogenetic networks using ggplot2 and ggtree☆11Oct 22, 2025Updated 4 months ago
- Repository of GESIS Shiny Workshop.☆11Jun 6, 2025Updated 8 months ago