A Landscape Genomic Analysis Toolkit in R
☆23May 24, 2026Updated 2 weeks ago
Alternatives and similar repositories for algatr
Users that are interested in algatr are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- association analysis of distance matrices using gradient forest approach☆16Oct 7, 2025Updated 8 months ago
- Population Genomics in R workshop☆12Mar 24, 2024Updated 2 years ago
- Spatio-temporal trends in habitat suitability from ecological niche models☆15Feb 4, 2026Updated 4 months ago
- Dispersal simulations based on ecological niches☆16Dec 7, 2023Updated 2 years ago
- A framework for simulation-based inference in evolutionary biology☆28Jan 13, 2026Updated 4 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- R package to create packed image mosaics (inspired by https://github.com/qnzhou/Mosaic)☆14Jun 28, 2023Updated 2 years ago
- ☆13Mar 8, 2024Updated 2 years ago
- Introductory lesson to generate range maps for butterfly-host plant interactions and predict distributional shifts using publicly availab…☆18Aug 8, 2024Updated last year
- polysat 1.7: tools for polyploid microsatellite analysis☆12Dec 20, 2024Updated last year
- Genetic Algorithm for Demographic Model Analysis☆56Feb 3, 2026Updated 4 months ago
- An R package for the calculation of taxonomic, phenotypic and phylogenetic metrics across grid cells.☆16Aug 20, 2025Updated 9 months ago
- quickLD, a large-scale, long-range Linkage Disequilibrium analysis tool utilizing parallel CPU, GPU or heterogeneous computing.☆10Jun 10, 2022Updated 4 years ago
- Teaching Material for a Machine Learning course with Keras and Tensorflow in R☆18May 9, 2025Updated last year
- Preparation of species occurrences and distribution data for the use in phylogenetic analyses. SpeciesgeocodeR is built for data explorat…☆23Aug 31, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Tutorials for bioinformatics and data analysis related to landscape genomics☆30Jan 19, 2019Updated 7 years ago
- ☆36Dec 28, 2021Updated 4 years ago
- Pipeline to analyze eDNA metabarcoding samples (PE and SE, demultiplexed, multiplexed)☆12Jul 6, 2022Updated 3 years ago
- 📦 R package to compute functional diversity indices efficiently☆42Mar 30, 2026Updated 2 months ago
- Package to plot phylogenies with custom shapes☆24Apr 17, 2024Updated 2 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆45Jul 25, 2025Updated 10 months ago
- Wrapper function for 'inlabru' for modeling species distribution models from disparate datasets.☆28Jan 30, 2026Updated 4 months ago
- Tools for Modeling Niches and Distributions of Species☆29Aug 19, 2025Updated 9 months ago
- Creates a simple OTU table from Kraken2 report.☆13Oct 15, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆14Apr 14, 2026Updated last month
- small scripts, functions or bits of code for parsing genomic data☆14Sep 24, 2022Updated 3 years ago
- Cartography of Genomic Interactions Enables Deep Analysis of Single-Cell Expression Data (Nature Communications, 2023)☆19May 27, 2024Updated 2 years ago
- A Python3 script for removal of outlier sequences from a multiple sequence alignment (FASTA format).☆10Jan 26, 2025Updated last year
- ☆48Nov 6, 2022Updated 3 years ago
- Quarto extension for an opinionated letter template with customized letter head☆11Jun 5, 2024Updated 2 years ago
- R package to find species interactions from co-occurrence data☆16Feb 27, 2024Updated 2 years ago
- Analysis and visualisation of ecological communities in R☆19Feb 25, 2026Updated 3 months ago
- Machuruku☆32Jan 20, 2025Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- An R package to repair broken GIS polygons using the prepair (https://github.com/tudelft3d/prepair) Cpp library - mirror to the Gitlab re…☆12Nov 9, 2022Updated 3 years ago
- An introduction to GAM(M)s☆12Dec 14, 2022Updated 3 years ago
- R-Ladies Dublin meetups slides and code☆12Feb 15, 2021Updated 5 years ago
- que paquete☆10Jul 17, 2024Updated last year
- Workshop on Genomics - Genomics Adventure☆47Jan 22, 2026Updated 4 months ago
- A generalised, dynamic DNA reference library for metabarcoding of fishes☆19May 6, 2026Updated last month
- Ergonomic tooling to assess models of spatial data☆41Apr 16, 2025Updated last year