peng-lab / HistoBistroLinks
Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)
☆84Updated last year
Alternatives and similar repositories for HistoBistro
Users that are interested in HistoBistro are comparing it to the libraries listed below
Sorting:
- Tools to build deep learning pipelines.☆112Updated last year
- ☆28Updated last year
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆32Updated last year
- ☆57Updated 3 years ago
- Solid Tumor Associative Modeling in Pathology☆102Updated last week
- Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024☆145Updated 9 months ago
- Virtual Alignment of pathoLogy Image Series☆195Updated 5 months ago
- List of pathology feature extractors and foundation models☆161Updated 6 months ago
- Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs m…☆26Updated 3 months ago
- ☆57Updated 2 years ago
- Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images☆20Updated last year
- Feather - Lightweight supervised slide foundation models (ICML 2025)☆120Updated 4 months ago
- Standardized benchmark for computational pathology foundation models.☆119Updated last month
- Awesome List of Digital and Computational Pathology Resources☆94Updated 11 months ago
- Multimodal prototyping for cancer survival prediction - ICML 2024☆103Updated 9 months ago
- GrandQC tool for tissue detection and quality control in pathology☆76Updated 9 months ago
- First commit☆65Updated 3 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆106Updated last month
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆157Updated last year
- ☆37Updated 8 months ago
- Histopathology Image Analysis☆92Updated 2 years ago
- ☆101Updated 2 years ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆77Updated 10 months ago
- Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…☆56Updated last year
- A generative toolkit to translate H&E images to multiplexed IHC☆56Updated last year
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆70Updated 3 years ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆109Updated 10 months ago
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆44Updated last year
- Encoder-Decoder Cell and Nuclei segmentation models☆95Updated last month
- Stain normalization tools for histological analysis and computational pathology☆165Updated last month