peng-lab / HistoBistroLinks
Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)
☆85Updated last year
Alternatives and similar repositories for HistoBistro
Users that are interested in HistoBistro are comparing it to the libraries listed below
Sorting:
- Tools to build deep learning pipelines.☆112Updated last year
- Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024☆144Updated 9 months ago
- ☆28Updated last year
- Virtual Alignment of pathoLogy Image Series☆192Updated 5 months ago
- Standardized benchmark for computational pathology foundation models.☆119Updated last month
- Multimodal prototyping for cancer survival prediction - ICML 2024☆103Updated 9 months ago
- List of pathology feature extractors and foundation models☆159Updated 5 months ago
- ☆57Updated 2 years ago
- Feather - Lightweight supervised slide foundation models (ICML 2025)☆116Updated 4 months ago
- Solid Tumor Associative Modeling in Pathology☆102Updated this week
- Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs m…☆25Updated 3 months ago
- First commit☆64Updated 3 years ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆32Updated last year
- Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images☆20Updated last year
- ☆57Updated 3 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆107Updated 3 weeks ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆77Updated 10 months ago
- Awesome List of Digital and Computational Pathology Resources☆94Updated 10 months ago
- GrandQC tool for tissue detection and quality control in pathology☆75Updated 9 months ago
- Histopathology Image Analysis☆93Updated 2 years ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆109Updated 10 months ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆35Updated 9 months ago
- Encoder-Decoder Cell and Nuclei segmentation models☆95Updated 3 weeks ago
- sc-MTOP is an analysis framework based on deep learning and computational pathology. This framework aims to characterize the tumor ecosys…☆43Updated 6 months ago
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆44Updated 11 months ago
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆157Updated last year
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆70Updated 3 years ago
- Stain normalization tools for histological analysis and computational pathology☆164Updated 3 weeks ago
- A generative toolkit to translate H&E images to multiplexed IHC☆56Updated 11 months ago
- ☆102Updated 2 years ago