☆36Mar 21, 2025Updated last year
Alternatives and similar repositories for hd_wsi
Users that are interested in hd_wsi are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- CEll spatial Organization-based graph convolutional network☆27Feb 3, 2024Updated 2 years ago
- A Python library of pre- and post-processing tools for applying deep learning to whole-slide images☆22Jan 16, 2023Updated 3 years ago
- ☆26Nov 28, 2022Updated 3 years ago
- Python 3 library for the augmentation & normalization of H&E images☆65Sep 12, 2022Updated 3 years ago
- Scripts for https://www.nature.com/articles/s41598-018-27707-4, using Convolutional Neural Network to detect lung cancer tumor area☆51Apr 8, 2021Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- The official deployment of the Digital Slide Archive and HistomicsTK.☆134Updated this week
- Gpu accelerated vahadane stain normalization for Digital Pathology workflows.☆27Feb 23, 2024Updated 2 years ago
- Whole Slide image (WSI) conversion for brightfield histology images☆39Mar 16, 2026Updated last week
- ☆19Mar 13, 2026Updated last week
- Codebase for training the SubCell models☆18Updated this week
- scPretrain: Multi-task self-supervised learning for cell type classification☆24Dec 24, 2021Updated 4 years ago
- Inference code for HoVer-NeXt☆47Oct 26, 2025Updated 4 months ago
- An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow☆14Apr 30, 2021Updated 4 years ago
- An open-source digital pathology based rapid image annotation tool☆90Feb 26, 2026Updated 3 weeks ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Preprocessing module for large histological images☆21Jun 16, 2023Updated 2 years ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆85Jul 11, 2024Updated last year
- ☆29Mar 30, 2025Updated 11 months ago
- Python tool for stitching histopathology tissue fragments into artificial whole-mounts.☆23Dec 5, 2025Updated 3 months ago
- ☆17Aug 8, 2022Updated 3 years ago
- Class for getting ROIs and masks from annotated pyramidal images. A work in progress.☆12Jul 3, 2021Updated 4 years ago
- RAPID: a Real-time, GPU-Accelerated Parallelized Image processing software for large-scale multiplexed fluorescence microscopy Data☆12Dec 3, 2022Updated 3 years ago
- AtlasPatch: An Efficient and Scalable Tool for Whole Slide Image Preprocessing☆46Feb 18, 2026Updated last month
- ☆21Mar 18, 2026Updated last week
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, …☆241Mar 7, 2026Updated 2 weeks ago
- Topological Feature Extraction on Whole Slide Images using Graph Neural Networks.☆22Aug 17, 2020Updated 5 years ago
- An automatic deep tabular learning package☆13Oct 30, 2023Updated 2 years ago
- NuLite - Lightweight and Fast Model for Nuclei Instance Segmentation and Classification☆33Jan 19, 2026Updated 2 months ago
- Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images☆20Jul 8, 2024Updated last year
- Accessible and interoperable whole slide image analysis☆189Mar 9, 2026Updated 2 weeks ago
- Multilevel cnn notebooks for Camelyon17☆19Sep 29, 2019Updated 6 years ago
- Radiopathomics: a framework of fusing multi-scale images information to enrich description of tumor heterogeneity for LARC patients prior…☆22Apr 20, 2021Updated 4 years ago
- A probabilistic factor model for spatial transcriptomics data with subcellular resolution☆25May 3, 2023Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- The implementations for NeurIPS 2024 paper "Leveraging Tumor Heterogeneity: Heterogeneous Graph Representation Learning for Cancer Surviv…☆12Jun 11, 2025Updated 9 months ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆38Feb 6, 2026Updated last month
- The Colour Deconvolution 2 ImageJ plugin implements stain unmixing with Ruifrok and Johnston’s method described in [Ruifrok AC, Johnston …☆12Aug 5, 2022Updated 3 years ago
- ☆26Mar 12, 2026Updated last week
- Interoperability between SpatialData and the Xenium Explorer☆25Jul 31, 2024Updated last year
- Gene Expression Prediction from Histology Images via Hypergraph Neural Networks☆16May 19, 2025Updated 10 months ago
- Fast and scalable search of whole-slide images via self-supervised deep learning - Nature Biomedical Engineering☆111Jun 9, 2023Updated 2 years ago