impromptuRong / hd_wsiLinks
☆37Updated 8 months ago
Alternatives and similar repositories for hd_wsi
Users that are interested in hd_wsi are comparing it to the libraries listed below
Sorting:
- Virtual Alignment of pathoLogy Image Series☆192Updated 5 months ago
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆85Updated last year
- QuPath extension for Segment Anything Model (SAM)☆125Updated 4 months ago
- Tools to build deep learning pipelines.☆112Updated last year
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆84Updated last year
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆70Updated 3 years ago
- Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs m…☆25Updated 3 months ago
- Re-stained whole slide image alignment☆35Updated 2 years ago
- ☆28Updated last year
- GrandQC tool for tissue detection and quality control in pathology☆75Updated 9 months ago
- Awesome List of Digital and Computational Pathology Resources☆94Updated 10 months ago
- Solid Tumor Associative Modeling in Pathology☆102Updated this week
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆107Updated last month
- Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images☆20Updated last year
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆32Updated last year
- Image-translation-assisted segmentation in 3D☆26Updated 3 years ago
- List of pathology feature extractors and foundation models☆159Updated 6 months ago
- Pipeline for computational pathology☆38Updated last year
- Pytorch-adaptation of GPU-accelerated StainTool's stain normalization algorithms☆38Updated last year
- Histopathology Image Analysis☆93Updated 2 years ago
- Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…☆56Updated 11 months ago
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆36Updated last year
- Stain normalization tools for histological analysis and computational pathology☆164Updated 3 weeks ago
- Simple tool for converting WSIs from cellSens VSI to pyramidal TIFF☆24Updated 3 months ago
- Gpu accelerated vahadane stain normalization for Digital Pathology workflows.☆25Updated last year
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆110Updated 10 months ago
- Whole Slide image (WSI) conversion for brightfield histology images☆36Updated 3 weeks ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆35Updated 10 months ago
- DeeperHistReg - Source Code☆80Updated last year
- 🔬 Code-free deep segmentation for computational pathology☆56Updated last year