impromptuRong / hd_wsiLinks
☆36Updated 10 months ago
Alternatives and similar repositories for hd_wsi
Users that are interested in hd_wsi are comparing it to the libraries listed below
Sorting:
- Tools to build deep learning pipelines.☆113Updated last year
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆83Updated 2 years ago
- Virtual Alignment of pathoLogy Image Series☆205Updated 7 months ago
- Solid Tumor Associative Modeling in Pathology☆110Updated 2 weeks ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆110Updated 3 months ago
- Re-stained whole slide image alignment☆36Updated 2 years ago
- QuPath extension for Segment Anything Model (SAM)☆126Updated this week
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆84Updated last year
- Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images☆20Updated last year
- ☆31Updated last year
- Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs m…☆27Updated 5 months ago
- Awesome List of Digital and Computational Pathology Resources☆103Updated last year
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆113Updated last year
- GrandQC tool for tissue detection and quality control in pathology☆80Updated last month
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆37Updated last year
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆37Updated this week
- List of pathology feature extractors and foundation models☆167Updated this week
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆80Updated last year
- Pipeline for computational pathology☆37Updated 2 years ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆32Updated last year
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆72Updated 3 years ago
- Segment Anything for Histopathology☆58Updated 4 months ago
- Whole Slide image (WSI) conversion for brightfield histology images☆37Updated 3 weeks ago
- Image-translation-assisted segmentation in 3D☆28Updated 3 years ago
- Histopathology Image Analysis☆93Updated 2 years ago
- Pytorch-adaptation of GPU-accelerated StainTool's stain normalization algorithms☆39Updated this week
- Encoder-Decoder Cell and Nuclei segmentation models☆95Updated 2 months ago
- Standardized benchmark for computational pathology foundation models.☆130Updated 3 months ago
- Simple tool for converting WSIs from cellSens VSI to pyramidal TIFF☆25Updated 5 months ago
- Feather - Lightweight supervised slide foundation models (ICML 2025)☆133Updated last week