impromptuRong / hd_wsiLinks
☆35Updated 3 months ago
Alternatives and similar repositories for hd_wsi
Users that are interested in hd_wsi are comparing it to the libraries listed below
Sorting:
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆80Updated last year
- GrandQC tool for tissue detection and quality control in pathology☆49Updated 3 months ago
- Re-stained whole slide image alignment☆33Updated last year
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆29Updated last year
- Pipeline for computational pathology☆35Updated last year
- Whole Slide image (WSI) conversion for brightfield histology images☆37Updated this week
- First commit☆62Updated 2 years ago
- Virtual Alignment of pathoLogy Image Series☆162Updated 6 months ago
- Histopathology Image Analysis☆92Updated last year
- End-to-end pipeline to go from raw H&E slides to normalised extracted features for training☆26Updated last year
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆24Updated 2 months ago
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆32Updated last year
- DeeperHistReg - Source Code☆61Updated last year
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆101Updated 5 months ago
- Tools to build deep learning pipelines.☆103Updated 7 months ago
- Standardized benchmark for computational pathology foundation models.☆83Updated this week
- Histopathology Slides Preprocessing Pipeline☆38Updated 3 months ago
- 🔬 Code-free deep segmentation for computational pathology☆53Updated last year
- Python 3 library for the augmentation & normalization of H&E images☆56Updated 2 years ago
- Image-translation-assisted segmentation in 3D☆26Updated 3 years ago
- Amgad M, Salgado R, Cooper LA. A panoptic segmentation approach for tumor-infiltrating lymphocyte assessment: development of the MuTILs m…☆19Updated 3 weeks ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆35Updated 4 months ago
- Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…☆53Updated 6 months ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆67Updated 2 years ago
- Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images☆19Updated 11 months ago
- Encoder-Decoder Cell and Nuclei segmentation models☆92Updated last month
- sc-MTOP is an analysis framework based on deep learning and computational pathology. This framework aims to characterize the tumor ecosys…☆35Updated last month
- ☆55Updated 3 years ago
- Solid Tumor Associative Modeling in Pathology☆80Updated this week
- QuPath extension for Segment Anything Model (SAM)☆109Updated 3 months ago