A tool for rapidly labeling objects using deep learning feature embedding
☆34Apr 7, 2026Updated last week
Alternatives and similar repositories for PatchSorter
Users that are interested in PatchSorter are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Intelligent data partitioning using quality control metrics☆18Jun 10, 2025Updated 10 months ago
- Gpu accelerated vahadane stain normalization for Digital Pathology workflows.☆27Feb 23, 2024Updated 2 years ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆38Feb 6, 2026Updated 2 months ago
- HistoQC is an open-source quality control tool for digital pathology slides☆322Dec 10, 2025Updated 4 months ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆85Jul 11, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python 3 library for the augmentation & normalization of H&E images☆66Sep 12, 2022Updated 3 years ago
- Whole Slide image (WSI) conversion for brightfield histology images☆40Mar 16, 2026Updated 3 weeks ago
- ☆13Aug 30, 2024Updated last year
- ☆14Aug 13, 2025Updated 8 months ago
- ☆71Sep 23, 2024Updated last year
- Encoder-Decoder Cell and Nuclei segmentation models☆100Nov 14, 2025Updated 5 months ago
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆37Apr 29, 2024Updated last year
- QuPath extension to work with images through OMERO's web API☆10Feb 10, 2026Updated 2 months ago
- NuInsSeg: A Fully Annotated Dataset for Nuclei Instance Segmentation in H&E-Stained Histological Images☆41Jul 15, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆15Jul 16, 2024Updated last year
- Hibou: Foundational Models for Pathology☆77Oct 23, 2024Updated last year
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆268Dec 23, 2023Updated 2 years ago
- The repository provide augment function of "Stain mix-up: Unsupervised domain generalization for histopathology images"☆12Feb 22, 2022Updated 4 years ago
- A simple web application for for viewing and navigating pathology whole-slide-images in your browser.☆16Sep 22, 2023Updated 2 years ago
- Awesome Domain Generalization for Computational Pathology☆24Nov 7, 2024Updated last year
- TiffSlide - cloud native openslide-python replacement based on tifffile☆106Mar 12, 2026Updated last month
- A whole-slide image reader for TensorFlow☆24Nov 24, 2025Updated 4 months ago
- Toolbox for measuring adversarial robustness to many transforms☆19Apr 24, 2025Updated 11 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- CellLENS: Cross-domain information fusion for enhanced cell population delineation in single-cell spatial-omics data☆34Jul 24, 2025Updated 8 months ago
- Coincides with blogpost for using geojson and shapely☆33Nov 16, 2020Updated 5 years ago
- List of academic institutes/companies working on computer-based digital pathology image analysis☆45Aug 7, 2025Updated 8 months ago
- QuPath extension to run StarDist nucleus detection☆48Jul 2, 2025Updated 9 months ago
- [Nature Communications] O2VAE: a model for orientation-invariant representation learning (phenotyping) in cell biology data☆39Mar 26, 2025Updated last year
- Code and GUI for Feature-driven Local Cell Graph (FLocK): New Computational Pathology based descriptors☆16Jun 15, 2023Updated 2 years ago
- Histopathological Image Classification with Cell Morphology Aware Deep Neural Networks☆25Aug 23, 2025Updated 7 months ago
- Cell Graph Transformer for Nuclei Classification, AAAI 2024☆27Oct 8, 2024Updated last year
- ☆36Mar 21, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.☆18Apr 1, 2026Updated last week
- Trained models for use with QuPath☆16Aug 7, 2021Updated 4 years ago
- CytoBrowser, a JavaScript and Node.js driven environment for fast and accessible collaborative online visualization, assessment, and anno…☆20Updated this week
- Tutorial to start working with Multiple Instance Learning☆14Jul 5, 2023Updated 2 years ago
- torchlogic is a pytorch framework for developing Neuro-Symbolic AI systems and implements Neural Reasoning Networks.☆17Sep 18, 2025Updated 6 months ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆56Jun 20, 2023Updated 2 years ago
- Cross-platform data for sequencing-based spatial transcriptomics benchmarking☆13Oct 26, 2023Updated 2 years ago