choosehappy / PatchSorter
A tool for rapidly labeling objects using deep learning feature embedding
☆32Updated 8 months ago
Alternatives and similar repositories for PatchSorter:
Users that are interested in PatchSorter are comparing it to the libraries listed below
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆30Updated last year
- Pipeline for computational pathology☆34Updated last year
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆69Updated 9 months ago
- Solid Tumor Associative Modeling in Pathology☆73Updated last week
- Python 3 library for the augmentation & normalization of H&E images☆54Updated 2 years ago
- Whole Slide image (WSI) conversion for brightfield histology images☆36Updated 3 weeks ago
- An open-source digital pathology based rapid image annotation tool☆76Updated 2 weeks ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆60Updated 2 months ago
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆31Updated 2 years ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆35Updated 2 months ago
- GrandQC tool for tissue detection and quality control in pathology☆40Updated last month
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆24Updated last week
- 🔬 Code-free deep segmentation for computational pathology☆53Updated 10 months ago
- ☆31Updated last month
- ☆44Updated 2 years ago
- Histopathology Slides Preprocessing Pipeline☆36Updated last month
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆99Updated 5 months ago
- Histopathology Image Analysis☆93Updated last year
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆97Updated 3 months ago
- A Python library for deep learning on whole-slide images☆51Updated 3 years ago
- A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.☆29Updated 11 months ago
- Synthetic histology using GANs, for deep learning model explainability and trainee education.☆15Updated last year
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆68Updated last year
- List of pathology feature extractors and foundation models☆117Updated 2 months ago
- Gpu accelerated vahadane stain normalization for Digital Pathology workflows.☆25Updated last year
- ☆19Updated last year
- Image-translation-assisted segmentation in 3D☆26Updated 3 years ago
- Interactive deep learning whole-cell segmentation and thresholding using partial annotations☆39Updated last week
- Tools to build deep learning pipelines.☆99Updated 5 months ago
- Re-stained whole slide image alignment☆33Updated last year