A tool for rapidly labeling objects using deep learning feature embedding
☆34Apr 7, 2026Updated 2 months ago
Alternatives and similar repositories for PatchSorter
Users that are interested in PatchSorter are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Intelligent data partitioning using quality control metrics☆18Jun 10, 2025Updated last year
- Gpu accelerated vahadane stain normalization for Digital Pathology workflows.☆27Feb 23, 2024Updated 2 years ago
- An open-source digital pathology based rapid image annotation tool☆90May 21, 2026Updated 3 weeks ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆39Feb 6, 2026Updated 4 months ago
- HistoQC is an open-source quality control tool for digital pathology slides☆326Apr 13, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆85Jul 11, 2024Updated last year
- Python 3 library for the augmentation & normalization of H&E images☆66Sep 12, 2022Updated 3 years ago
- ☆14Aug 13, 2025Updated 10 months ago
- ☆72Sep 23, 2024Updated last year
- Encoder-Decoder Cell and Nuclei segmentation models☆103Nov 14, 2025Updated 7 months ago
- QuPath extension to work with images through OMERO's web API☆10Feb 10, 2026Updated 4 months ago
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆28Dec 3, 2025Updated 6 months ago
- NuInsSeg: A Fully Annotated Dataset for Nuclei Instance Segmentation in H&E-Stained Histological Images☆41Jul 15, 2024Updated last year
- ☆15Jul 16, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Hibou: Foundational Models for Pathology☆78Oct 23, 2024Updated last year
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆270Dec 23, 2023Updated 2 years ago
- The official deployment of the Digital Slide Archive and HistomicsTK.☆137Updated this week
- A simple web application for for viewing and navigating pathology whole-slide-images in your browser.☆16Sep 22, 2023Updated 2 years ago
- Awesome Domain Generalization for Computational Pathology☆24Nov 7, 2024Updated last year
- TiffSlide - cloud native openslide-python replacement based on tifffile☆107Mar 12, 2026Updated 3 months ago
- A whole-slide image reader for TensorFlow☆25Nov 24, 2025Updated 6 months ago
- PathBench-MIL: A comprehensive, flexible Benchmarking / AutoML framework for multiple instance learning in Histopathology☆29Jan 9, 2026Updated 5 months ago
- Toolbox for measuring adversarial robustness to many transforms☆19Apr 24, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Coincides with blogpost for using geojson and shapely☆33Nov 16, 2020Updated 5 years ago
- CellLENS: Cross-domain information fusion for enhanced cell population delineation in single-cell spatial-omics data☆35Jul 24, 2025Updated 10 months ago
- List of academic institutes/companies working on computer-based digital pathology image analysis☆46Aug 7, 2025Updated 10 months ago
- QuPath extension to run StarDist nucleus detection☆48Jul 2, 2025Updated 11 months ago
- [Nature Communications] O2VAE: a model for orientation-invariant representation learning (phenotyping) in cell biology data☆39Mar 26, 2025Updated last year
- Code and GUI for Feature-driven Local Cell Graph (FLocK): New Computational Pathology based descriptors☆17Jun 15, 2023Updated 2 years ago
- [NeurIPS 2023] The Rise of AI Language Pathologists: Exploring Two-level Prompt Learning for Few-shot Weakly-supervised Whole Slide Image…☆40May 14, 2024Updated 2 years ago
- Histopathological Image Classification with Cell Morphology Aware Deep Neural Networks☆25Aug 23, 2025Updated 9 months ago
- Cell Graph Transformer for Nuclei Classification, AAAI 2024☆27Oct 8, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆36Mar 21, 2025Updated last year
- Lab for quantitative bioimage analysis experiments in Python☆19Feb 16, 2026Updated 3 months ago
- A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.☆18Jun 2, 2026Updated last week
- Trained models for use with QuPath☆16Aug 7, 2021Updated 4 years ago
- CytoBrowser, a JavaScript and Node.js driven environment for fast and accessible collaborative online visualization, assessment, and anno…☆20Jun 6, 2026Updated last week
- CellNet, for cancer☆11Jul 14, 2022Updated 3 years ago
- Explainability of Deep Learning Models☆29Mar 24, 2023Updated 3 years ago