Quality control of whole-slide images through multi-class semantic segmentation of artifacts
☆38Jan 25, 2024Updated 2 years ago
Alternatives and similar repositories for pathology-artifact-detection
Users that are interested in pathology-artifact-detection are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆57Jun 20, 2023Updated 2 years ago
- Pipeline for computational pathology☆38Jan 4, 2024Updated 2 years ago
- CBMIL: Clustering-based Multi-instance Learning Network for Whole Slide Image Classification☆11Mar 5, 2023Updated 3 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆112Nov 8, 2025Updated 4 months ago
- SEGmentation using Graphs with Inexact aNd Incomplete labels☆21Mar 25, 2022Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Awesome Domain Generalization for Computational Pathology☆24Nov 7, 2024Updated last year
- code related to submission of "Accurate diagnosis of lymphoma on whole slide histopathology images using deep learning"☆10May 12, 2020Updated 5 years ago
- TiffSlide - cloud native openslide-python replacement based on tifffile☆106Mar 12, 2026Updated 2 weeks ago
- Non-disruptive collagen characterization in clinical histopathology using cross-modality image synthesis☆10Apr 25, 2025Updated 11 months ago
- PyTorch library for breast cancer metastasis detection in whole-slide images of sentinel lymph node tissue from the Camelyon dataset☆15Nov 25, 2019Updated 6 years ago
- Released code for the paper 'End-to-end Multiple Instance Learning for Whole-Slide Cytopathology of Urothelial Carcinoma'☆10Nov 24, 2021Updated 4 years ago
- Bayesian Inference of Slide-level Confidence via Uncertainty Index Thresholding☆30Sep 6, 2024Updated last year
- ☆68Sep 23, 2024Updated last year
- HistoQC is an open-source quality control tool for digital pathology slides☆319Dec 10, 2025Updated 3 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- GPU-accelerated image processing in QuPath☆16Oct 23, 2021Updated 4 years ago
- Remove pen-marking annotations on whole slide images(WSIs) for data achiving.☆18Aug 9, 2022Updated 3 years ago
- Image filters for digital pathology: detect pen marks, background, and artifacts. Use them for preprocessing towards deep learning☆30Sep 30, 2020Updated 5 years ago
- An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow☆14Apr 30, 2021Updated 4 years ago
- Toolbox for measuring adversarial robustness to many transforms☆19Apr 24, 2025Updated 11 months ago
- [ESWA 2023] Implementation of DSCA: A Dual-stream Network with Cross-attention on Whole-Slide Image Pyramids for Cancer Prognosis☆21Apr 24, 2024Updated last year
- COntrastive Biomarker Representation Alignment (COBRA) [CVPR25]☆23Oct 1, 2025Updated 5 months ago
- INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration☆12Jun 30, 2021Updated 4 years ago
- ☆16Jul 8, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Image-to-Image Translation in PyTorch☆24Sep 21, 2023Updated 2 years ago
- Computational Pathology Toolbox developed by TIA Centre, University of Warwick.☆515Updated this week
- Spatial Multiomics Profiler for Spatial Characterization of Tissue Microenvironment (https://smprofiler.io)☆23Updated this week
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆85Jul 11, 2024Updated last year
- Ahcore is the AI for Oncology core computational pathology toolkit☆16Oct 3, 2024Updated last year
- Pure Python tools for reading and writing all TIFF IFDs, sub-IFDs, and tags.☆56Jan 14, 2026Updated 2 months ago
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆268Dec 23, 2023Updated 2 years ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆38Feb 6, 2026Updated last month
- A Python library for deep learning on whole-slide images☆52Nov 5, 2021Updated 4 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- MuRCL: Multi-instance Reinforcement Contrastive Learning for Whole Slide Image Classification☆28Dec 16, 2021Updated 4 years ago
- ☆46Jan 10, 2022Updated 4 years ago
- Piecewise alignment for layers of mosaics☆42Feb 18, 2026Updated last month
- ☆35Jun 24, 2021Updated 4 years ago
- Python tools for creating and manipulating OME-TIFF multi-resolution pyramid images.☆18Aug 8, 2025Updated 7 months ago
- Synthetic histology using GANs, for deep learning model explainability and trainee education.☆16Jan 5, 2024Updated 2 years ago
- A tool for training machine-learning models with whole-slide imaging datasets☆26Dec 27, 2023Updated 2 years ago