DIAGNijmegen / pathology-artifact-detection
Quality control of whole-slide images through multi-class semantic segmentation of artifacts
☆30Updated last year
Alternatives and similar repositories for pathology-artifact-detection:
Users that are interested in pathology-artifact-detection are comparing it to the libraries listed below
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆52Updated last year
- Pipeline for computational pathology☆34Updated last year
- Python 3 library for the augmentation & normalization of H&E images☆52Updated 2 years ago
- ☆57Updated 4 months ago
- Whole Slide image (WSI) conversion for brightfield histology images☆34Updated this week
- A tool for rapidly labeling objects using deep learning feature embedding☆30Updated 6 months ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆96Updated 2 months ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆66Updated 7 months ago
- Solid Tumor Associative Modeling in Pathology☆58Updated this week
- Histopathology Image Analysis☆93Updated last year
- GPU-accelerated stain normalization command line tool☆19Updated last year
- 🔬 Code-free deep segmentation for computational pathology☆53Updated 8 months ago
- A Python library for deep learning on whole-slide images☆51Updated 3 years ago
- This repository contains the official implementation of the research paper: "Towards Training Large-Scale Pathology Foundation Models: fr…☆27Updated last month
- Toolbox for measuring adversarial robustness to many transforms☆19Updated 2 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆66Updated 2 years ago
- A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.☆28Updated 8 months ago
- ☆36Updated 2 years ago
- Interpretable Gland-Graph Networks☆20Updated 11 months ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆34Updated last week
- An open-source digital pathology based rapid image annotation tool☆75Updated this week
- ☆43Updated last year
- A Girder plugin for pathology image annotations and analysis.☆64Updated last week
- Gpu accelerated vahadane stain normalization for Digital Pathology workflows.☆23Updated 11 months ago
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆30Updated 2 years ago
- DLBCL-Morph dataset containing high resolution tissue microarray scans from 209 DLBCL cases, with geometric features computed using deep …☆36Updated 4 years ago
- Re-stained whole slide image alignment☆32Updated last year
- Delete the label from a whole-slide image☆63Updated 3 years ago
- Interactive deep learning whole-cell segmentation and thresholding using partial annotations☆35Updated this week
- ☆40Updated 3 years ago