Alternatives and similar repositories for pathology-artifact-detection

Users that are interested in pathology-artifact-detection are comparing it to the libraries listed below

• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆37Updated this week
• DIAGNijmegen / pathology-he-auto-augment
  H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
  ☆54Updated 2 years ago
• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆71Updated 11 months ago
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆35Updated last year
• DIAGNijmegen / pathology-hooknet
  ☆61Updated 9 months ago
• andreped / fast-stain-normalization
  GPU-accelerated stain normalization command line tool
  ☆21Updated last year
• KatherLab / preProcessing
  ☆45Updated 2 years ago
• PathologyDataScience / NuCLS
  NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation
  ☆54Updated 3 years ago
• TissueImageAnalytics / iguana
  Interpretable Gland-Graph Networks
  ☆21Updated last year
• lucasrla / wsi-preprocessing
  Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning
  ☆55Updated last year
• DIAGNijmegen / pathology-whole-slide-data
  A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
  ☆102Updated 7 months ago
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆53Updated last year
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆78Updated last week
• mahmoodlab / TriPath
  Analysis of 3D pathology samples using weakly supervised AI - Cell
  ☆101Updated 5 months ago
• KatherLab / HIA
  Histopathology Image Analysis
  ☆92Updated last year
• wenqi006 / SlideGraph
  ☆55Updated 3 years ago
• impromptuRong / hd_wsi
  ☆35Updated 3 months ago
• kaiko-ai / towards_large_pathology_fms
  This repository contains the official implementation of the research paper: "Towards Training Large-Scale Pathology Foundation Models: fr…
  ☆29Updated 5 months ago
• kaiko-ai / eva
  Evaluation framework for oncology foundation models (FMs)
  ☆106Updated this week
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆56Updated 2 years ago
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆33Updated last year
• alexjfoote / reetoolbox
  Toolbox for measuring adversarial robustness to many transforms
  ☆19Updated 2 months ago
• choosehappy / PatchSorter
  A tool for rapidly labeling objects using deep learning feature embedding
  ☆32Updated 10 months ago
• mahmoodlab / CRANE
  Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine
  ☆31Updated 3 years ago
• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆72Updated this week
• simongraham / hovernet_inference
  HoVer-Net inference code for simultaneous nuclear segmentation and classification
  ☆67Updated 2 years ago
• markowetzlab / pathml-tutorial
  A tutorial demonstration of pathml on an example dataset for the manuscript "PathML: A unified framework for WSI analysis with deep learn…
  ☆24Updated 3 years ago
• vqdang / H2T
  ☆35Updated 2 years ago
• sara-nl / multi-scale-tools
  ☆18Updated 3 years ago
• pearcetm / svs-deidentifier
  Strip potentially identifying label and macro images from Aperio SVS whole slide image files
  ☆32Updated last year