DIAGNijmegen / pathology-artifact-detection
Quality control of whole-slide images through multi-class semantic segmentation of artifacts
☆30Updated last year
Alternatives and similar repositories for pathology-artifact-detection:
Users that are interested in pathology-artifact-detection are comparing it to the libraries listed below
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆54Updated last year
- Python 3 library for the augmentation & normalization of H&E images☆54Updated 2 years ago
- GPU-accelerated stain normalization command line tool☆20Updated last year
- Pipeline for computational pathology☆34Updated last year
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆99Updated 5 months ago
- A tool for rapidly labeling objects using deep learning feature embedding☆32Updated 8 months ago
- This repository contains the official implementation of the research paper: "Towards Training Large-Scale Pathology Foundation Models: fr…☆28Updated 3 months ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆69Updated 9 months ago
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆54Updated 3 years ago
- Interpretable Gland-Graph Networks☆21Updated last year
- ☆57Updated 7 months ago
- Whole Slide image (WSI) conversion for brightfield histology images☆36Updated 3 weeks ago
- ☆44Updated 2 years ago
- Toolbox for measuring adversarial robustness to many transforms☆19Updated 2 years ago
- 🔬 Code-free deep segmentation for computational pathology☆53Updated 10 months ago
- ☆35Updated 2 years ago
- An open-source digital pathology based rapid image annotation tool☆76Updated 2 weeks ago
- Histopathology Image Analysis☆93Updated last year
- ☆18Updated 3 years ago
- Interactive Segmentation of Nucleus☆63Updated 2 years ago
- Solid Tumor Associative Modeling in Pathology☆73Updated last week
- ☆40Updated 3 years ago
- A Python library for deep learning on whole-slide images☆51Updated 3 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆67Updated 2 years ago
- Re-stained whole slide image alignment☆33Updated last year
- A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.☆29Updated 11 months ago
- Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning☆52Updated last year
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆97Updated 3 months ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆35Updated 2 months ago
- DLBCL-Morph dataset containing high resolution tissue microarray scans from 209 DLBCL cases, with geometric features computed using deep …☆36Updated 4 years ago