Quality control of whole-slide images through multi-class semantic segmentation of artifacts
☆39Jan 25, 2024Updated 2 years ago
Alternatives and similar repositories for pathology-artifact-detection
Users that are interested in pathology-artifact-detection are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆56Jun 20, 2023Updated 3 years ago
- Pipeline for computational pathology☆44Jan 4, 2024Updated 2 years ago
- CBMIL: Clustering-based Multi-instance Learning Network for Whole Slide Image Classification☆11Mar 5, 2023Updated 3 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆119Nov 8, 2025Updated 9 months ago
- SEGmentation using Graphs with Inexact aNd Incomplete labels☆21Mar 25, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- code related to submission of "Accurate diagnosis of lymphoma on whole slide histopathology images using deep learning"☆10May 12, 2020Updated 6 years ago
- 🚀 H2G-Net: Segmentation of breast cancer region from whole slide images☆29Jul 21, 2025Updated last year
- PyTorch library for breast cancer metastasis detection in whole-slide images of sentinel lymph node tissue from the Camelyon dataset☆15Nov 25, 2019Updated 6 years ago
- TiffSlide - cloud native openslide-python replacement based on tifffile☆106Jul 3, 2026Updated last month
- An open-source digital pathology based rapid image annotation tool☆91Updated this week
- Bayesian Inference of Slide-level Confidence via Uncertainty Index Thresholding☆30Sep 6, 2024Updated last year
- HistoQC is an open-source quality control tool for digital pathology slides☆329Aug 3, 2026Updated 2 weeks ago
- Released code for the paper 'End-to-end Multiple Instance Learning for Whole-Slide Cytopathology of Urothelial Carcinoma'☆10Nov 24, 2021Updated 4 years ago
- ☆75Sep 23, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Non-disruptive collagen characterization in clinical histopathology using cross-modality image synthesis☆11Apr 25, 2025Updated last year
- Awesome Domain Generalization for Computational Pathology☆25Nov 7, 2024Updated last year
- Image filters for digital pathology: detect pen marks, background, and artifacts. Use them for preprocessing towards deep learning☆29Sep 30, 2020Updated 5 years ago
- GPU-accelerated image processing in QuPath☆16Oct 23, 2021Updated 4 years ago
- Remove pen-marking annotations on whole slide images(WSIs) for data achiving.☆18Aug 9, 2022Updated 4 years ago
- A Python package for tissue and pen marking segmentation on low-magnification (1.25x) whole slide images.☆18Feb 2, 2026Updated 6 months ago
- An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow☆14Apr 30, 2021Updated 5 years ago
- Code for CHAMMI-75 - ICLR 2026☆18Jun 29, 2026Updated last month
- Toolbox for measuring adversarial robustness to many transforms☆19Apr 24, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- [ESWA 2023] Implementation of DSCA: A Dual-stream Network with Cross-attention on Whole-Slide Image Pyramids for Cancer Prognosis☆22Apr 24, 2024Updated 2 years ago
- INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration☆12Jun 30, 2021Updated 5 years ago
- ☆16Jul 8, 2024Updated 2 years ago
- Image-to-Image Translation in PyTorch☆24Sep 21, 2023Updated 2 years ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆86Jul 11, 2024Updated 2 years ago
- Ahcore is the AI for Oncology core computational pathology toolkit☆17Oct 3, 2024Updated last year
- Computational Pathology Toolbox developed by TIA Centre, University of Warwick.☆543Updated this week
- Spatial Multiomics Profiler for Spatial Characterization of Tissue Microenvironment (https://smprofiler.io)☆23Jul 24, 2026Updated 3 weeks ago
- Pure Python tools for reading and writing all TIFF IFDs, sub-IFDs, and tags.☆56Jan 14, 2026Updated 7 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Web app & Backend API☆15Oct 24, 2023Updated 2 years ago
- ☆36Jun 24, 2021Updated 5 years ago
- MuRCL: Multi-instance Reinforcement Contrastive Learning for Whole Slide Image Classification☆29Dec 16, 2021Updated 4 years ago
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆273Dec 23, 2023Updated 2 years ago
- A Python library for deep learning on whole-slide images☆52Nov 5, 2021Updated 4 years ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆39Aug 3, 2026Updated 2 weeks ago
- Piecewise alignment for layers of mosaics☆60Aug 8, 2026Updated last week