Whole Slide image (WSI) conversion for brightfield histology images
☆42Aug 10, 2026Updated this week
Alternatives and similar repositories for wsic
Users that are interested in wsic are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Interpretable Gland-Graph Networks☆22Mar 7, 2024Updated 2 years ago
- iSyntax to raw format converter☆24Nov 26, 2025Updated 8 months ago
- Gpu accelerated vahadane stain normalization for Digital Pathology workflows.☆28Feb 23, 2024Updated 2 years ago
- Computational Pathology Toolbox developed by TIA Centre, University of Warwick.☆545Updated this week
- A tool for rapidly labeling objects using deep learning feature embedding☆36Updated this week
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Interactive Segmentation of Nucleus☆68Nov 22, 2022Updated 3 years ago
- Pipeline for computational pathology☆44Jan 4, 2024Updated 2 years ago
- Python package for reading DICOM WSI file sets.☆51Updated this week
- ☆37Mar 21, 2025Updated last year
- ☆14Aug 13, 2025Updated last year
- GrandQC tool for tissue detection and quality control in pathology☆116Dec 27, 2025Updated 7 months ago
- Use this package to compute intrinsic dimensionality of your task given a fixed neural network in PYTORCH!☆37Nov 22, 2022Updated 3 years ago
- ☆11Oct 21, 2023Updated 2 years ago
- Histopathology Image Analysis☆95Jul 6, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- List of academic institutes/companies working on computer-based digital pathology image analysis☆46Jul 17, 2026Updated last month
- ☆28Jul 3, 2026Updated last month
- Powerful, open-source AI tools for digital pathology.☆372May 7, 2026Updated 3 months ago
- C++ whole slide image reader with native python bindings☆55Jul 27, 2026Updated 3 weeks ago
- Various tools for creating and manipulating Zarr V3 data with the zarrs Rust crate☆34Feb 1, 2026Updated 6 months ago
- Prototype implementation of zarr v3 in rust☆18Nov 20, 2023Updated 2 years ago
- Hibou: Foundational Models for Pathology☆79Oct 23, 2024Updated last year
- source code of Inter-MIL: self-interactive multi-instance learning☆17Aug 1, 2023Updated 3 years ago
- Python library for reading tiles from wsi tiff-files.☆20Jul 30, 2026Updated 2 weeks ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- TiffSlide - cloud native openslide-python replacement based on tifffile☆106Jul 3, 2026Updated last month
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆119Nov 8, 2025Updated 9 months ago
- Standardized benchmark for computational pathology foundation models.☆154Nov 7, 2025Updated 9 months ago
- Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.☆79Jan 9, 2023Updated 3 years ago
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆30Dec 3, 2025Updated 8 months ago
- A Python library of pre- and post-processing tools for applying deep learning to whole-slide images☆22Jan 16, 2023Updated 3 years ago
- ☆35Jan 29, 2025Updated last year
- Google Colab notebook for Cellpose☆11Aug 21, 2025Updated 11 months ago
- Syntax - the arrangement of whole-slide-images and their image tiles to create well-formed computational pathology pipelines.☆55Nov 22, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆16Updated this week
- Python 3 library for the augmentation & normalization of H&E images☆66Sep 12, 2022Updated 3 years ago
- ☆219Jul 23, 2025Updated last year
- ☆21Jun 3, 2024Updated 2 years ago
- Python script to comvert Philips iSyntax files to OME-TIFF☆14Dec 30, 2022Updated 3 years ago
- Pytorch implementation of NuClick for interactive cell segmentation☆38Apr 17, 2024Updated 2 years ago
- nuclei.io: Human-in-the-loop active learning framework for pathology image analysis☆89May 18, 2025Updated last year