pFindStudio / pDeepLinks
pDeep: Predicting MS/MS Spectra of Peptides with Deep Learning
☆41Updated 6 years ago
Alternatives and similar repositories for pDeep
Users that are interested in pDeep are comparing it to the libraries listed below
Sorting:
- Deep (Transfer) Learning for Peptide Retention Time Prediction☆52Updated 4 years ago
- This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network☆33Updated 2 years ago
- Collisional cross-section prediction for modified and multiconformational peptides☆13Updated 3 months ago
- Using deep learning to generate in silico spectral libraries for data-independent acquisition analysis.☆43Updated 3 years ago
- ☆71Updated last year
- R Package for Systematic Optimization of Metabolomic Data Processing☆17Updated 7 months ago
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆30Updated 10 months ago
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆70Updated last month
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆47Updated 7 months ago
- Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful fo…☆91Updated 2 years ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆29Updated last week
- a python package for molecular formula analysis in MS-based small molecule studies☆31Updated 3 months ago
- ☆12Updated 2 weeks ago
- ☆36Updated 5 months ago
- ☆19Updated 7 months ago
- Proteomics Mass Spectrometry Datasets for Machine Learning☆19Updated last year
- The Git Account of LCMSMethods.org☆11Updated 6 years ago
- ☆18Updated 6 years ago
- MS/MS prediction for peptides☆24Updated 4 years ago
- ☆15Updated 4 years ago
- Pytorch implementation of DeepNovoV2, a state-of-the-art de novo peptide sequencing model.☆25Updated 6 years ago
- ☆22Updated 4 years ago
- A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations☆23Updated 5 months ago
- pDeepXL: MS/MS spectrum prediction for cross-linked peptide pairs by deep learning☆12Updated 4 years ago
- Streamlining Mass Spectrometry Data Visualization with Pandas☆20Updated this week
- Democratizing ML in proteomics☆44Updated this week
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆23Updated 11 months ago
- ☆28Updated last year
- A small library to provide peak picking for software processing mass spectrometry data☆23Updated 11 months ago
- Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.☆45Updated 3 years ago