Alternatives and similar repositories for residualbind

Users that are interested in residualbind are comparing it to the libraries listed below

• vagarwal87 / Xpresso
  Predicting gene expression levels from genomic sequences
  ☆54Updated 5 years ago
• hawkjo / freebarcodes
  FREE Divergence Error-Correcting DNA Barcodes
  ☆27Updated 7 months ago
• saketkc / pyseqlogo
  Python package to plot sequence logos
  ☆29Updated last year
• zwang-bioinformatics / GOGO
  An Improved Algorithm to Measure the Semantic Similarity of Gene Ontology Terms
  ☆18Updated 5 years ago
• maximilianh / crisporPaper
  Code for the CRISPOR article, all data and code to create figures and analysis
  ☆44Updated 9 years ago
• vagarwal87 / saluki_paper
  Saluki, a method to predict mRNA half-lives from sequence
  ☆25Updated 2 years ago
• qmarcou / IGoR
  IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:
  ☆51Updated 3 years ago
• ding-lab / hotspot3d
  3D hotspot mutation proximity analysis tool
  ☆48Updated 2 years ago
• Seeliglab / 2017---Deep-learning-yeast-UTRs
  Code from "Deep Learning Of The Regulatory Grammar Of Yeast 5′ Untranslated Regions From 500,000 Random Sequences"
  ☆15Updated 7 years ago
• dincarnato / RNAFramework
  RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
  ☆40Updated this week
• uio-bmi / compairr
  Comparison of Adaptive Immune Receptor Repertoires
  ☆27Updated 7 months ago
• pinellolab / CRISPRitz
  Tool package to perform in-silico CRISPR analysis and assessment
  ☆31Updated last year
• jbkinney / mavenn
  MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect
  ☆28Updated 3 weeks ago
• jpiper / pyDNase
  Python module for the easy handling and analysis of DNase-seq data
  ☆37Updated 6 years ago
• Illumina / PrimateAI-3D
  ☆67Updated 6 months ago
• pdxgx / neoepiscope
  predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data
  ☆27Updated 2 years ago
• p-koo / creme-nn
  https://www.biorxiv.org/content/10.1101/2023.07.03.547592v2
  ☆30Updated 7 months ago
• betteridiot / seqlogo
  Python port of the R Bioconductor `seqLogo` package
  ☆35Updated last year
• crisprVerse / crisprDesign
  Comprehensive design of CRISPR gRNAs for nucleases and base editors
  ☆23Updated 6 months ago
• bcgsc / ntEmbd
  Deep learning embedding for nucleotide sequences
  ☆19Updated 5 months ago
• gagneurlab / MMSplice_MTSplice
  Tissue-specific variant effect predictions on splicing
  ☆42Updated 2 years ago
• openvax / gtfparse
  Parsing tools for GTF (gene transfer format) files
  ☆121Updated 6 months ago
• stracquadaniolab / pygna
  A Python package for gene network analysis
  ☆32Updated 3 years ago
• pinellolab / AmpUMI
  Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)
  ☆42Updated 2 weeks ago
• GreiffLab / immuneSIM
  ☆38Updated last year
• RTH-tools / crisproff
  off-targeting assessment of Cas9 gRNAs
  ☆13Updated 4 years ago
• santiago1234 / iCodon
  iCodon customizes gene expression based on the codon composition
  ☆15Updated last year
• lwgray / pyEntrezId
  Converts Ensembl, Uniprot, and HGNC IDs to Entrez Gene Id
  ☆46Updated 2 years ago
• uclahs-cds / package-moPepGen
  Multi-Omics Peptide Generator
  ☆26Updated 3 weeks ago
• Kuanhao-Chao / splam
  ✂️ Deep learning-based splice site predictor that improves spliced alignments
  ☆54Updated 6 months ago