Python port of the R Bioconductor `seqLogo` package
☆37Feb 20, 2026Updated 5 months ago
Alternatives and similar repositories for seqlogo
Users that are interested in seqlogo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- a pure Python multi-version tolerant, runtime and OS-agnostic Binary Alignment Map (BAM) file parser and random access tool☆99Jan 27, 2026Updated 6 months ago
- Software for the visualization of sequence-function relationships☆214Jan 6, 2026Updated 7 months ago
- Code for the analysis performed in the paper "Transcription factor stoichiometry, motif affinity and syntax regulate single-cell chromati…☆14Oct 16, 2025Updated 9 months ago
- draw sequence logos tailored to deep mutational scanning (DMS) data☆12Feb 12, 2026Updated 5 months ago
- Two pass alignment for long reads☆22Mar 9, 2021Updated 5 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Python-based UCSC genome browser snapshot-taker and gallery-maker☆12May 21, 2024Updated 2 years ago
- Gene regulatory network reconstruction from pseudotemporal single-cell gene expression data☆11Jul 6, 2026Updated last month
- PTa Analysis TOolkit☆19Jun 9, 2026Updated 2 months ago
- A file watcher written in Rust☆11May 4, 2026Updated 3 months ago
- Handy scripts for routine bioinformatic analysis☆21May 5, 2025Updated last year
- We present HRIBO (High-throughput annotation by Ribo-seq), a workflow to enable reproducible and high-throughput analysis of bacterial Ri…☆14May 22, 2025Updated last year
- A lightweight library for working with PAF (Pairwise mApping Format) files☆30May 25, 2026Updated 2 months ago
- Signal based nanopore RNA demultiplexing with convolutional neural networks☆40Aug 2, 2024Updated 2 years ago
- Just a python fasta/q parser based on kseq.h☆14Jul 13, 2020Updated 6 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Parse ArchR arrow files to anndata h5ad☆16Dec 14, 2023Updated 2 years ago
- Fast5 API provided by ONT Research☆21Mar 17, 2022Updated 4 years ago
- PSI-MOD ontology for modified and unmodified amino acid residues☆16Jul 31, 2026Updated last week
- Supervised and unsupervised self-organising maps☆13Jun 22, 2026Updated last month
- scripts for analysis associated with Cas9Enrichment publication☆12Feb 10, 2020Updated 6 years ago
- URMAP ultra-fast read mapper☆38Jun 15, 2020Updated 6 years ago
- Docker image as base for building full MAKER image☆11Feb 28, 2022Updated 4 years ago
- Error correction of ONT transcript reads☆58Sep 6, 2023Updated 2 years ago
- Convert, explore, and manipulate GFF and GTF files (used in bioinformatics) using a sqlite-based approach☆36Dec 20, 2010Updated 15 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A set of files to do genomics analysis on python☆19Jun 5, 2025Updated last year
- Genomic interval operations on Pandas DataFrames☆194Aug 3, 2026Updated last week
- Pipeline for Universal Mapping of ATAC-seq☆27Sep 23, 2025Updated 10 months ago
- ☆17Oct 20, 2023Updated 2 years ago
- Parallel Construction of Suffix Arrays in Rust☆26Updated this week
- Bayesian Markov Model motif discovery tool version 2 - An expectation maximization algorithm for the de novo discovery of enriched motifs…☆17Feb 1, 2021Updated 5 years ago
- ☆14Jan 28, 2019Updated 7 years ago
- Калькулятор на python / kivy☆12Oct 1, 2021Updated 4 years ago
- Numerical Run Length Encoding and Arithmetic in Cython☆19Aug 2, 2026Updated last week
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Sequence Distance Graph framework: graph + reads + mapping + analysis☆25Jun 4, 2022Updated 4 years ago
- Vaeda method for computational doublet annotation☆20Feb 1, 2026Updated 6 months ago
- Data Processing Kitchen Sink for proteomics data☆15Jun 15, 2026Updated last month
- Flip-flop basecaller for Oxford Nanopore reads☆97Jan 13, 2022Updated 4 years ago
- Source codes and examples for DeepPrime☆15Dec 17, 2024Updated last year
- Transcription Factor Motif Instance Neighborhood Decomposition and Interpretation☆25Updated this week
- An R package for Splice-aware quantification of translation using Ribo-seq data☆21Dec 20, 2023Updated 2 years ago