betteridiot / seqlogoLinks
Python port of the R Bioconductor `seqLogo` package
☆33Updated 10 months ago
Alternatives and similar repositories for seqlogo
Users that are interested in seqlogo are comparing it to the libraries listed below
Sorting:
- ☆38Updated last year
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆39Updated this week
- Python package to plot sequence logos☆29Updated last year
- off-targeting assessment of Cas9 gRNAs☆13Updated 4 years ago
- Code and data used in The Great Repertoire Project☆30Updated 4 years ago
- HLA-II ligand predictor.☆43Updated 2 years ago
- pyJASPAR: A Pythonic interface to JASPAR transcription factor motifs☆27Updated last month
- A simple pythonic interface to biomart.☆55Updated 5 years ago
- ExplaiNN: interpretable and transparent neural networks for genomics☆48Updated 2 months ago
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆59Updated last week
- Tool for deep mutational scanning experiments.☆51Updated 3 months ago
- ☆29Updated 4 months ago
- COSMIS is a framework for quantifying the mutational constraint on amino acid sites in 3D spatial neighborhoods. The framework currently …☆17Updated 2 years ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆68Updated last week
- This repository hosts a minimal version of a Python API for BPNet.☆44Updated last week
- Comparison of Adaptive Immune Receptor Repertoires☆27Updated 4 months ago
- Predicting gene expression levels from genomic sequences☆53Updated 5 years ago
- an online cancer cell line catalogue integrating HLA type, predicted neo-epitopes, virus and gene expression☆10Updated last year
- APA Regression Net - Predict and Engineer Alternative Polyadenylation☆39Updated 3 years ago
- The tRNA adaptation index☆18Updated 2 months ago
- Immunoglobulin and T-Cell receptor rearrangement software☆49Updated last year
- Modeling of human 5′ UTRs enables the design of new sequences for target levels of translation and 5′ UTR variant prediction.☆48Updated 5 years ago
- https://www.biorxiv.org/content/10.1101/2023.07.03.547592v2☆29Updated 5 months ago
- DRUGZ software☆23Updated 3 years ago
- G4Hunter (2012_2015)- IECB - Bordeaux☆14Updated 5 years ago
- predicting peptide and TCR interaction☆20Updated 4 years ago
- Dataloader for applying sequence models to personalized genomics☆26Updated 2 weeks ago
- Absolve antibody variable domain sequence analysis☆16Updated 6 years ago
- software for the analysis and visualization of deep mutational scanning data☆34Updated 2 years ago
- ☆66Updated 4 months ago