ome / omero-documentationLinks
Sphinx-based documentation for the Open Microscopy Environment
☆22Updated this week
Alternatives and similar repositories for omero-documentation
Users that are interested in omero-documentation are comparing it to the libraries listed below
Sorting:
- Deployment infrastructure for the Image Data Resource☆13Updated 3 weeks ago
- OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological …☆211Updated last week
- ☆37Updated this week
- Jupyter Notebooks for the Image Data Resource☆18Updated 2 years ago
- Galaxy tools for image analysis☆18Updated 2 weeks ago
- OME model (specification, code generator, implementation)☆15Updated last month
- OMERO Docker compose example☆27Updated last month
- A minimal Zarr image viewer based on Viv.☆158Updated last week
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆136Updated this week
- The RPC library used in ImJoy.☆25Updated last year
- Experimental micro-service for implementing the Zarr spec over HTTP☆18Updated last month
- Get Your Brain Together Neuroimage Registration Workshops and Hackathons☆20Updated 8 months ago
- Python project containing Ice remoting code for OMERO☆24Updated 2 weeks ago
- Package providing bioimaging functionality using TileDB. Source of the tiledb-bioimg Python package.☆18Updated 4 months ago
- native Python dataclasses for the OME data model☆58Updated this week
- An OMERO.web app for creating Figures from images in OMERO☆17Updated last week
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆47Updated this week
- Jupyter notebooks from our OMERO Plus for High Content Screening & Analysis webinar☆13Updated last year
- Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python☆215Updated 6 months ago
- CLIJ is deprecated. Visit CLIJ2☆56Updated 4 years ago
- Pydantic models for OME-NGFF☆24Updated last week
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆28Updated last week
- ☆49Updated this week
- Basic example of using OME-Zarr in a Nextflow pipeline☆16Updated 3 weeks ago
- serve Zarr datasets via HTTP☆31Updated 2 years ago
- A minimal Python package for reading OME-Zarr (meta)data☆31Updated this week
- Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆200Updated this week
- Not HDF5☆184Updated last week
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 3 years ago
- Command-line client for Fractal☆46Updated last week