Alternatives and similar repositories for deployment

Users that are interested in deployment are comparing it to the libraries listed below

• mobie / mobie-viewer-fiji
  ☆41Updated last week
• ome / ome-zarr-py
  Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
  ☆217Updated last week
• ome / omero-cli-transfer
  An OMERO CLI plugin for creating transfer packets between OMERO servers.
  ☆19Updated this week
• ome / omero-py
  Python project containing Ice remoting code for OMERO
  ☆27Updated 2 weeks ago
• ome / ngff
  Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
  ☆145Updated 2 weeks ago
• BioImageTools / ome-zarr-image-analysis-nextflow
  Basic example of using OME-Zarr in a Nextflow pipeline
  ☆19Updated 4 months ago
• chanzuckerberg / napari-hub
  Discover, install, and share napari plugins
  ☆54Updated last month
• ome-zarr-models / ome-zarr-models-py
  A minimal Python package for reading, writing and validating OME-Zarr (meta)data
  ☆36Updated 3 weeks ago
• apeer-micro / apeer-ometiff-library
  Easily read and write ome-tiff images in python
  ☆28Updated last year
• tlambert03 / ome-types
  native Python dataclasses for the OME data model
  ☆64Updated last week
• COBA-NIH / MicroscopyForBeginnersReferenceGuide
  A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation
  ☆29Updated 3 weeks ago
• JaneliaSciComp / pydantic-ome-ngff
  Pydantic models for OME-NGFF
  ☆24Updated 2 months ago
• imjoy-team / kaibu
  Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.
  ☆35Updated 8 months ago
• glencoesoftware / bioformats2raw
  Bio-Formats image file format to raw format converter
  ☆102Updated last week
• glencoesoftware / webinar-notebooks
  Jupyter notebooks from our OMERO Plus for High Content Screening & Analysis webinar
  ☆13Updated 2 years ago
• spatial-image / spatial-image
  A multi-dimensional spatial image data structure for scientific Python.
  ☆43Updated 4 months ago
• spatial-image / multiscale-spatial-image
  Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.
  ☆54Updated 3 weeks ago
• piximi / piximi
  A browser-based deep learning tool for image annotation, segmentation, classification, and measurement.
  ☆36Updated 2 months ago
• glencoesoftware / raw2ometiff
  Raw format to OME-TIFF converter
  ☆56Updated 2 weeks ago
• AllenCellModeling / aicsimageio
  Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python
  ☆220Updated last week
• clEsperanto / pyclesperanto
  GPU-accelerated Image Processing library for Python
  ☆52Updated this week
• fmicompbio / ez_zarr
  GIve easy, high-level access to ome-zarr fileset
  ☆22Updated 2 months ago
• ome / omero-cli-zarr
  ☆18Updated last week
• ome / omero-ms-zarr
  Experimental micro-service for implementing the Zarr spec over HTTP
  ☆20Updated this week
• ome / openmicroscopy
  OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological …
  ☆214Updated last week
• MouseLand / cellpose-napari
  napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool
  ☆61Updated last year
• aeisenbarth / ngff-writer
  A writer and reader for NGFF OME-Zarr datasets
  ☆14Updated 4 years ago
• fractal-analytics-platform / fractal-client
  Command-line client for Fractal
  ☆47Updated this week
• haesleinhuepf / napari-assistant
  ☆33Updated 7 months ago
• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆42Updated last week