TileDB-Inc / TileDB-BioImaging
Package providing bioimaging functionality using TileDB. Source of the tiledb-bioimg Python package.
☆18Updated this week
Alternatives and similar repositories for TileDB-BioImaging:
Users that are interested in TileDB-BioImaging are comparing it to the libraries listed below
- Python API and Jupyter widget for Vitessce☆44Updated last month
- Experimental micro-service for implementing the Zarr spec over HTTP☆18Updated last month
- A minimal Zarr image viewer based on Viv.☆143Updated last week
- Python interface to TileDB Cloud REST API☆15Updated this week
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆42Updated last month
- A flexible and extensible API for annotated 2D matrix data stored in multiple underlying formats.☆74Updated 2 weeks ago
- Vitessce is a visual integration tool for exploration of spatial single-cell experiments.☆202Updated this week
- Registries for biological entities, coupled to public ontologies.☆13Updated this week
- ☆31Updated last week
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆130Updated 3 weeks ago
- Spatialproteomics is a light weight wrapper around xarray with the intention to facilitate the data exploration and analysis of highly mu…☆17Updated last week
- Static plotting for spatialdata☆49Updated this week
- Framework for image and flow cytometry analysis☆24Updated this week
- TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUma…☆22Updated 2 years ago
- ☆35Updated this week
- Raw format to OME-TIFF converter☆50Updated 2 weeks ago
- ☆55Updated this week
- Minimum Information about Tissue Imaging☆20Updated last year
- ☆24Updated 8 months ago
- The RPC library used in ImJoy.☆24Updated 8 months ago
- Schema.org Data Models for HTAN☆14Updated last month
- Python project containing Ice remoting code for OMERO☆23Updated this week
- Fast reconstruction of spatial networks from bioimages.☆25Updated last week
- A performant scientific image visualization system.☆34Updated last week
- ☆17Updated 3 weeks ago
- requirements, examples, and tests for expression matrix file formats☆22Updated 6 years ago
- serve Zarr datasets via HTTP☆28Updated last year
- Light-weight Jupyter notebook tracker.☆34Updated 2 weeks ago