Alternatives and similar repositories for galaxy-image-analysis

Users that are interested in galaxy-image-analysis are comparing it to the libraries listed below

• bgruening / docker-galaxy-imaging
  Galaxy Docker repository with Imaging tools (Galaxy Imaging flavour)
  ☆12Updated 5 years ago
• galaxyproject / iwc
  Galaxy Workflows maintained by the Intergalactic Workflow Commission
  ☆40Updated this week
• usegalaxy-eu / usegalaxy-eu-tools
  List of tools included in https://usegalaxy.eu
  ☆32Updated this week
• IDR / idr-notebooks
  Jupyter Notebooks for the Image Data Resource
  ☆18Updated 2 years ago
• ome / ome-model
  OME model (specification, code generator, implementation)
  ☆15Updated 3 months ago
• nf-core / mcmicro
  An end-to-end processing pipeline that transforms multi-channel whole-slide images into single-cell data.
  ☆16Updated last week
• HumanCellAtlas / metadata-schema
  This repo is for the metadata schemas associated with the HCA
  ☆67Updated last week
• hexylena / argparse2tool
  transparently build CWL and Galaxy XML tool definitions for any script that uses argparse
  ☆27Updated 7 months ago
• bgruening / coding_for_big_data
  X things you should take into consideration if you code for big data analysis
  ☆23Updated 7 years ago
• ome / omero-documentation
  Sphinx-based documentation for the Open Microscopy Environment
  ☆22Updated this week
• C3BI-pasteur-fr / ReGaTE
  Registration of Galaxy Tools in Elixir
  ☆12Updated 6 years ago
• usegalaxy-eu / infrastructure-playbook
  Ansible playbook for managing UseGalaxy.eu infrastructure.
  ☆21Updated last week
• ome / omero-py
  Python project containing Ice remoting code for OMERO
  ☆24Updated last week
• JEFworks-Lab / MERmaid
  WebGL-based viewer for spatially-resolved transcriptomics data
  ☆26Updated 2 years ago
• bio-tools / biotoolsSchema
  biotoolsSchema : Tool description data model for computational tools in life sciences
  ☆38Updated last year
• TailorDev / galaxy-tourbuilder
  🔝 The amazing Galaxy Tour Builder web extension. // See demo 👉
  ☆17Updated 5 years ago
• galaxyproject / idc
  Simon's Data Club - Reference data for Galaxy servers
  ☆10Updated last year
• aCLImatise / CliHelpParser
  Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)
  ☆14Updated 4 years ago
• common-workflow-lab / wdl-cwl-translator
  A translator from WDL to CWL v1.2
  ☆27Updated last week
• galaxyproject / galaxy-lib
  Subset of Galaxy (http://galaxyproject.org/) core code designed to be used as a library.
  ☆12Updated 4 years ago
• workflux / workflUX
  An open-source, cloud-ready web application for simplified deployment of big data workflows.
  ☆33Updated 3 weeks ago
• galaxyproject / gxformat2
  Galaxy Workflow Format 2
  ☆9Updated 3 months ago
• chanzuckerberg / ExpressionMatrix2
  Software for exploration of gene expression data from single-cell RNA sequencing.
  ☆28Updated 6 years ago
• usegalaxy-eu / sars-cov-2-processing-requests
  Request execution of Galaxy SARS-CoV-2 variation analysis workflows on input data you provide.
  ☆20Updated 3 years ago
• MaayanLab / FAIRshake
  ☆10Updated 8 months ago
• vitessce / vitessce-python
  Python API and Jupyter widget for Vitessce
  ☆47Updated this week
• HumanCellAtlas / sctools
  Utilities for large scale distributed single cell data processing
  ☆24Updated 2 weeks ago
• miti-consortium / MITI
  Minimum Information about Tissue Imaging
  ☆20Updated last year
• ELIXIR-Belgium / ena-upload-container
  This is a repository to build a Galaxy container which can be used to remove human traces from sequence reads and upload raw SARS-Cov-2 s…
  ☆10Updated last year
• galaxyproject / awesome-galaxy
  Awesome resources related to Galaxy project
  ☆12Updated 7 months ago