ome / openmicroscopyLinks
OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological light microscopy data. A joint project between universities, research establishments and industry in Europe and the USA, OME has over 20 active researchers with strong links to the microscopy community. Funded …
☆214Updated 3 weeks ago
Alternatives and similar repositories for openmicroscopy
Users that are interested in openmicroscopy are comparing it to the libraries listed below
Sorting:
- Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy E…☆411Updated last week
- ilastik-shell, applets, and workflows to string them together.☆386Updated this week
- ImageJ2 programming examples☆194Updated 2 years ago
- Read and write life sciences file formats☆142Updated 7 months ago
- Open-source software for exploring and analyzing large, high-dimensional image-derived data.☆166Updated 5 months ago
- A versatile image analysis software for biological image-based quantification using machine learning, especially for whole slide imaging.☆59Updated 4 years ago
- Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools a…☆157Updated last month
- Sphinx-based documentation for the Open Microscopy Environment☆23Updated last week
- OME model (specification, code generator, implementation)☆16Updated 2 weeks ago
- Fiji website☆37Updated 2 months ago
- Open Source Cross-Platform C++ library to read CZI image files☆72Updated 3 years ago
- Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python☆221Updated last month
- CLIJ is deprecated. Visit CLIJ2☆56Updated 4 years ago
- The ImageJ plugin to run deep-learning models☆97Updated 2 months ago
- Visualize, share and annotate your large 3D images online☆162Updated this week
- ImJoy: Deep Learning Made Easy!☆190Updated 2 years ago
- Bio-Formats image file format to raw format converter☆102Updated last month
- ImgLib2/BDV implementation of Stitching for large datasets☆78Updated 2 months ago
- The ImageJ wiki☆28Updated this week
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆149Updated last week
- Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆220Updated this week
- ImageJ Ops: "Write once, run anywhere" image processing☆92Updated last year
- Collaborative Annotation Toolkit for Massive Amounts of Image Data☆197Updated 2 weeks ago
- ☆41Updated 3 weeks ago
- GPU-accelerated image processing for everyone☆55Updated last year
- Model repository for bioimage.io☆17Updated 2 years ago
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆162Updated 5 months ago
- An introduction to bioimage analysis - http://bioimagebook.github.io☆76Updated 5 months ago
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆34Updated 2 years ago
- An OMERO.web app allowing to view images☆21Updated last month