Associations of genomic features, drugs and diseases
☆48Dec 8, 2022Updated 3 years ago
Alternatives and similar repositories for g2p-aggregator
Users that are interested in g2p-aggregator are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- python module for querying the vicc knowledgebase integration datastore☆11Jul 6, 2023Updated 3 years ago
- hgvslib provides functions to parse and compare the equivalency of variant strings described according to Human Genome Variation Society …☆18Dec 26, 2022Updated 3 years ago
- Sage Bionetworks derived standards for annotating content in Synapse.☆16Jul 2, 2026Updated 3 months ago
- Time to learn DSL2☆10Feb 9, 2023Updated 3 years ago
- The Functional Analysis through Hidden Markov Models Software and Server☆14Nov 6, 2014Updated 11 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Classifies genes as an oncogene, tumor suppressor gene, or as a non-driver gene by using Random Forests☆50Sep 2, 2026Updated last month
- Central repository for the VICC metakb web application☆15Updated this week
- Models and APIs for Genomic data. RETIRED 2018-01-24☆220Oct 28, 2022Updated 4 years ago
- Parallel Recipes : parallel workflow execution made easy☆13Sep 1, 2015Updated 11 years ago
- GA4GH Variation Representation Python Implementation☆64Updated this week
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Aug 19, 2022Updated 4 years ago
- Text mining cancer biomarkers for the CIVIC database☆23Oct 23, 2026Updated last week
- iBWA is a fork of Heng Li's BWA aligner with support for iteratively adding alternate haplotypes, reference patches, and variant hypothes…☆13Aug 6, 2014Updated 12 years ago
- Breakpointer is a fast algorithm to locate breakpoints of structural variants from single-end reads produced by next-generation sequencin…☆10May 2, 2014Updated 12 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- EXPERIMENTAL implementation of side graph☆10Apr 16, 2015Updated 11 years ago
- Platform for Oncogenomic Reporting and Interpretation (PORI)☆35Jul 27, 2026Updated 3 months ago
- Python client for GA4GH htsget protocol☆15Nov 7, 2022Updated 3 years ago
- A package to convert cancer data to GA4GH phenopacket☆10Aug 5, 2025Updated last year
- Backend Server for CIViC Project☆39Jul 6, 2023Updated 3 years ago
- OBO Library edition of NCIt☆25Aug 6, 2025Updated last year
- A Template for Clear and Simple Documentation of Bioinformatics Code☆16Jan 24, 2018Updated 8 years ago
- Bioconductor components for general cancer genomics☆11Feb 5, 2023Updated 3 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆20Dec 8, 2020Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆10Jul 21, 2022Updated 4 years ago
- Parse samtools pileup file to get how many bases and what kind of bases are called☆14Apr 30, 2024Updated 2 years ago
- ☆10Jan 25, 2019Updated 7 years ago
- picking up low allelic-fraction, somatic variants from tumor samples☆14Jan 4, 2018Updated 8 years ago
- ☆26Aug 7, 2019Updated 7 years ago
- A tool for sample swap identification in high throughput sequencing studies☆10Mar 4, 2025Updated last year
- Documentation for the MatchmakerExchange APIs☆34Feb 24, 2026Updated 8 months ago
- Javascript library for visualizing OncoGrids and related tracks☆26Aug 14, 2020Updated 6 years ago
- Concordance between variant callers☆17Nov 27, 2014Updated 11 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Remove primer sequence from BAM alignments by soft-clipping☆29Dec 5, 2019Updated 6 years ago
- GA4GH Beacon specification.☆33Jan 25, 2023Updated 3 years ago
- Variant Alert!, a framework to monitor every significant alteration in variant classification and gene-disease association between two ve…☆14Jul 19, 2021Updated 5 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆19Mar 5, 2019Updated 7 years ago
- Annotates variants in MAF with OncoKB annotation.☆147Aug 25, 2026Updated 2 months ago
- Web client for CIViC: Clinical Interpretations of Variants in Cancer☆50Nov 28, 2023Updated 2 years ago
- A community-maintained repository of cancer clinical knowledge bases and databases focused on cancer variants.☆340Updated this week