Alternatives and similar repositories for genieBPC:

Users that are interested in genieBPC are comparing it to the libraries listed below

• karissawhiting / cbioportalR
  R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases
  ☆22Updated 4 months ago
• MSKCC-Epi-Bio / gnomeR
  Package to wrangle and visualize genomic data in R
  ☆26Updated 5 months ago
• lgatto / tidies
  A Grammar of Data Manipulation for Omics Data
  ☆21Updated 4 years ago
• Bioconductor / BioC2020
  BioC2020: Where Software and Biology Connect
  ☆12Updated 2 years ago
• kharchenkolab / sccore
  Core utilities for single-cell RNA-seq
  ☆12Updated 3 months ago
• raysinensis / color_repel
  Repel Visually Similar Colors for Colorblind Users (CRAN)
  ☆10Updated 2 months ago
• LieberInstitute / megadepth
  R interface to megadepth: BigWig and BAM related utilities
  ☆12Updated 3 months ago
• stemangiola / rpharma2020_tidytranscriptomics
  ☆10Updated 4 years ago
• lcolladotor / biocthis
  Automate package and project setup for Bioconductor packages
  ☆51Updated last week
• maialab / quincunx
  quincunx: an R package to query, download and wrangle PGS Catalog data
  ☆13Updated 2 years ago
• federicomarini / ideal
  Interactive Differential Expression AnaLysis - DE made accessible and reproducible
  ☆29Updated 3 weeks ago
• waldronlab / ProjectAsPackage
  Demonstration of the use of an R package to organize a data analysis project
  ☆21Updated 5 years ago
• liuhong-jia / scAnno
  ☆24Updated 2 years ago
• stemangiola / tidySummarizedExperiment
  Brings SummarizedExperiment to the tidyverse
  ☆26Updated 9 months ago
• lianos / multiGSEA
  NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …
  ☆21Updated 4 years ago
• cran-task-views / Omics
  CRAN Task View: Genomics, Proteomics, Metabolomics, Transcriptomics, and Other Omics
  ☆18Updated last month
• malhamdoosh / EGSEA
  This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.
  ☆10Updated last year
• KatrionaGoldmann / volcano3D
  An R package to plot interactive three-way differential expression analysis
  ☆36Updated last year
• haotian-zhuang / findPC
  Automatic selection of number of principal components
  ☆15Updated 2 years ago
• lianos / sparrow
  Take command of your set enrichment analyses.
  ☆21Updated last week
• seandavi / BiocPkgTools
  Computable build reports, package metadata, and download stats from the Bioconductor project
  ☆21Updated 3 weeks ago
• Bioconductor / bioc-run
  Helper script for bioconductor/bioconductor_docker
  ☆11Updated last week
• MangiolaLaboratory / HPCell
  Convert your single-cell/spatial analyses to parallel HPC/cloud workflows just using pipes in R
  ☆13Updated 3 months ago
• igordot / babelgene
  ☆12Updated 2 years ago
• myles-lewis / glmmSeq
  Gene-level general linear mixed model
  ☆20Updated 2 months ago
• Syksy / curatedPCaData
  Bioconductor R-package: Curated Prostate Cancer Data
  ☆11Updated 5 months ago
• tidyomics / tidyomicsBlog
  the manifesto, workshops and tutorials of the tidy transcriptomics
  ☆12Updated 10 months ago
• leekgroup / networks_correction
  Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"
  ☆16Updated 5 years ago
• jokergoo / BioCartaImage
  BioCarta pathway images
  ☆11Updated last year
• Bioconductor / BuildABiocWorkshop
  Template for building a bioconductor workshop package using github actions
  ☆20Updated 8 months ago