DEPRECATED: replaced by linkml
☆24Apr 4, 2021Updated 4 years ago
Alternatives and similar repositories for biolinkml
Users that are interested in biolinkml are comparing it to the libraries listed below
Sorting:
- CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)☆17Jan 7, 2022Updated 4 years ago
- Schema and generated objects for biolink data model and upper ontology☆224Feb 25, 2026Updated last week
- Mapping between LinkML schemas☆31Updated this week
- Collation of metadata examples and notes for the project☆11Jan 30, 2026Updated last month
- Python parser for UCUM (Unified Code for Units of Measure) incl. converter to pint units☆14Updated this week
- This repository contains the data and code created under the project NLP4Rare-cm-uc3m.☆10Sep 14, 2021Updated 4 years ago
- Research Object BagIt archive☆21Jan 13, 2023Updated 3 years ago
- Ontology for representing scientific evidence and provenance information☆52Oct 2, 2025Updated 5 months ago
- Basic OpenMendel tutorials☆11Jul 24, 2022Updated 3 years ago
- Ontology for Biobanking☆16Jun 11, 2025Updated 8 months ago
- Continuous administration of the Greene Lab's electronic scrum☆13Updated this week
- Structure your data in a FAIR way using google sheets or TSVs. These are then converted to LinkML, and from there other formats☆49Feb 4, 2026Updated last month
- Website of our Carpentries-based workshop from July 2018 (former contact: @katrinleinweber)☆10May 12, 2020Updated 5 years ago
- Repository for representing genotypes and their association with phenotypes☆20Feb 2, 2026Updated last month
- A repository for version control of consortium data model(s)☆16Feb 25, 2026Updated last week
- PATO - the Phenotype And Trait Ontology☆59Feb 1, 2026Updated last month
- Metadata schema for the German Human Genome-Phenome Archive (GHGA)☆14Nov 17, 2025Updated 3 months ago
- The Academic Event Ontology (AEON) can be used to represent information regarding academic events.☆14Sep 4, 2024Updated last year
- python library for working with ontologies and ontology associations☆133Feb 11, 2025Updated last year
- Graph-based modeling environment for biology, including prototype editor and services☆42Feb 13, 2026Updated 2 weeks ago
- Library Carpentry website (archive)☆16Nov 16, 2024Updated last year
- API for linked biological knowledge☆66Apr 26, 2022Updated 3 years ago
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)☆46Jan 26, 2026Updated last month
- OBO Organized Knowledge: Training materials for becoming an OBO engineer☆116Feb 13, 2026Updated 2 weeks ago
- Schema for chemistry ontology classes☆20Feb 22, 2026Updated last week
- BioThings Explorer: a schema-based client for API interoperability☆14Aug 18, 2022Updated 3 years ago
- RDF Tables in Rust☆17Aug 26, 2022Updated 3 years ago
- Custom plugins, hooks, DET, and API examples☆18Oct 7, 2015Updated 10 years ago
- automating an RDF ontology import into Semantic Mediawiki☆16Jul 4, 2024Updated last year
- wrapper for multiple linkml storage engines☆24Feb 25, 2026Updated last week
- RDA WG PIDINST Metadata Schema☆26Feb 4, 2026Updated last month
- OBO Library edition of NCIt☆25Aug 6, 2025Updated 6 months ago
- A collection of useful python functions for looking up information and working with the Biolink Model☆24Feb 25, 2026Updated last week
- Data ingest application for Monarch Initiative knowledge graph using Koza☆21Feb 10, 2026Updated 3 weeks ago
- A Standard Database for Drug Repositioning☆19Jul 28, 2017Updated 8 years ago
- This ontology provides contribution roles for use in crediting persons or organizations.☆24Aug 16, 2023Updated 2 years ago
- Racket implementation of Cook and Lämmel's partial evaluation tutorial.☆32Aug 7, 2012Updated 13 years ago
- logic programming with SPARQL☆48Jan 16, 2023Updated 3 years ago
- Summary Dashboard for Open Biological and Biomedical Ontologies☆24Updated this week