biolink / biolinkml
DEPRECATED: replaced by linkml
☆23Updated 4 years ago
Alternatives and similar repositories for biolinkml:
Users that are interested in biolinkml are comparing it to the libraries listed below
- CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)☆16Updated 3 years ago
- Summary Dashboard for Open Biological and Biomedical Ontologies☆21Updated 4 months ago
- Integrated OBO ontology store☆45Updated 2 months ago
- A collection of useful python functions for looking up information and working with the Biolink Model☆24Updated 2 months ago
- Structure your data in a FAIR way using google sheets or TSVs. These are then converted to LinkML, and from there other formats☆45Updated this week
- Ontology for representing scientific evidence and provenance information☆50Updated 9 months ago
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)☆42Updated 2 months ago
- National Microbiome Data Collaborative (NMDC) unified data model☆32Updated last week
- NCATS Biomedical Translator Reasoners Standard API☆36Updated this week
- ☆14Updated 3 months ago
- Metadata schema for the German Human Genome-Phenome Archive (GHGA)☆13Updated 4 months ago
- Perform text mining for identification of HPO terms in free text from scientific publication.☆12Updated 10 months ago
- Standardized identifiers and OWL classes for chromosomes and chromosomal parts across species☆13Updated 2 months ago
- Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to c…☆50Updated this week
- Bayesian OWL ontology merging☆28Updated 9 months ago
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆13Updated last month
- Data ingest application for Monarch Initiative knowledge graph using Koza☆17Updated this week
- A system for managing OBO PURLs☆81Updated last month
- An app and library for building, conversion, and validation of GA4GH Phenopackets.☆13Updated this week
- PATO - the Phenotype And Trait Ontology☆59Updated this week
- THIS IS THE OLD REPO: Use this one instead: https://github.com/monarch-initiative/mondo-build☆17Updated 4 years ago
- Mapping between LinkML schemas☆22Updated last week
- A tutorial on using Open Biological and Biomedical Ontologies (OBO)☆58Updated 6 years ago
- Version 4 of the EMBL-EBI Ontology Lookup Service (OLS)☆63Updated this week
- The Ontology for Biomedical Investigations☆79Updated last week
- OBO Library edition of NCIt☆23Updated last month
- ☆10Updated last week
- Build for NCBITaxon☆27Updated last month
- sparql templates for linkml (alpha)☆11Updated 3 years ago
- ☆10Updated 6 months ago