biolink / biolinkml
DEPRECATED: replaced by linkml
☆23Updated 3 years ago
Alternatives and similar repositories for biolinkml:
Users that are interested in biolinkml are comparing it to the libraries listed below
- Integrated OBO ontology store☆44Updated 2 months ago
- The Ontology for Biomedical Investigations☆76Updated this week
- CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)☆16Updated 3 years ago
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆13Updated 2 months ago
- PATO - the Phenotype And Trait Ontology☆58Updated 2 weeks ago
- Summary Dashboard for Open Biological and Biomedical Ontologies☆21Updated last month
- Ontology for representing scientific evidence and provenance information☆50Updated 5 months ago
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)☆39Updated last month
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.☆20Updated this week
- Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to c…☆50Updated 5 months ago
- A tutorial on using Open Biological and Biomedical Ontologies (OBO)☆56Updated 5 years ago
- Version 4 of the EMBL-EBI Ontology Lookup Service (OLS)☆51Updated this week
- Structure your data in a FAIR way using google sheets or TSVs. These are then converted to LinkML, and from there other formats☆44Updated 4 months ago
- National Microbiome Data Collaborative (NMDC) unified data model☆27Updated this week
- A collection of useful python functions for looking up information and working with the Biolink Model☆21Updated 5 months ago
- NCATS Biomedical Translator Reasoners Standard API☆36Updated 3 months ago
- THIS IS THE OLD REPO: Use this one instead: https://github.com/monarch-initiative/mondo-build☆17Updated 3 years ago
- Github repo for the Experimental Factor Ontology (EFO)☆57Updated this week
- python library for working with ontologies and ontology associations☆123Updated last month
- Standardized identifiers and OWL classes for chromosomes and chromosomal parts across species☆13Updated 5 months ago
- Python toolkit for SSSOM mapping format☆49Updated this week
- ☆10Updated 4 months ago
- Metadata schema for the German Human Genome-Phenome Archive (GHGA)☆13Updated last month
- Neuro Behaviour Ontology: an ontology for human and animal behaviour processes and behaviour phenotypes☆25Updated 11 months ago
- This is the development repository for the STATistics Ontology (STATO). For more information and demonstration on the ontology content, p…☆32Updated last week
- OBO Library edition of NCIt☆23Updated 8 months ago
- Ontology for consent codes and data use requirements☆67Updated 2 years ago
- Bayesian OWL ontology merging☆28Updated 5 months ago
- Basic and Advanced OBO Graphs: specification and reference implementation☆64Updated 3 weeks ago
- Build for NCBITaxon☆27Updated last month