oncojs / oncogridLinks
Javascript library for visualizing OncoGrids and related tracks
☆26Updated 4 years ago
Alternatives and similar repositories for oncogrid
Users that are interested in oncogrid are comparing it to the libraries listed below
Sorting:
- Chart to aid in understanding mutations and their location on a gene.☆22Updated 2 years ago
- A needle plot for mutation data☆26Updated 7 years ago
- ☆68Updated 3 years ago
- See the main fork of this repository here >>>☆38Updated last month
- gnomAD browser pre-ASHG 2018☆33Updated 4 years ago
- ☆23Updated 6 years ago
- bradner lab computation pipeline scripts☆54Updated 3 years ago
- Fast fusion detection using kallisto☆80Updated 2 weeks ago
- UC Santa Cruz Computational Genomics Lab's Toil-based RNA-seq pipeline☆41Updated 4 years ago
- RNA-seq Viewer Team at the NCBI-assisted Boston Genomics Hackathon☆38Updated 7 years ago
- Parallel merging, squaring off and ensemble calling for genomic variants☆20Updated 5 years ago
- FireCloud Service Selector (FISS) -- Python bindings and CLI for FireCloud execution engine☆31Updated 3 months ago
- Library for manipulating genomic variants and predicting their effects☆84Updated 11 months ago
- TOPMed analysis pipeline☆52Updated last year
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆49Updated 6 years ago
- conda recipes for genomic data☆85Updated 3 years ago
- DeTiN is designed to measure tumor-in-normal contamination and improve somatic variant detection sensitivity when using a contaminated ma…☆50Updated 3 years ago
- Analysis from kallisto paper☆32Updated 9 years ago
- How to use CENTIPEDE to determine if a transcription factor is bound.☆26Updated 7 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- SeqMonk NGS visualisation and analysis tool☆49Updated last month
- EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…☆70Updated 2 years ago
- create a gemini-compatible database from a VCF☆56Updated 4 years ago
- Analysis Framework for Biological Data from High Throughput Experiments☆34Updated 8 years ago
- A tool to call somatic single nucleotide variants.☆41Updated 9 years ago
- Multi-sample somatic variant caller☆51Updated 3 years ago
- Run Picard on BAM files and collate 90 metrics into one file.☆41Updated 7 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- MetaSRA: normalized sample-specific metadata for the Sequence Read Archive☆43Updated 3 weeks ago