cancervariants / metakbLinks
Central repository for the VICC metakb web application
☆15Updated this week
Alternatives and similar repositories for metakb
Users that are interested in metakb are comparing it to the libraries listed below
Sorting:
- A phenotype-based tool for variant prioritization in WES and WGS data☆38Updated 2 years ago
- Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis☆23Updated last week
- Associations of genomic features, drugs and diseases☆48Updated 2 years ago
- non-redundant, compressed, journalled, file-based storage for biological sequences☆46Updated last month
- Platform for Oncogenomic Reporting and Interpretation (PORI)☆35Updated last week
- Website to analyze conflicting assertions in ClinVar☆18Updated last year
- Dockstore implementation of CGP core WGS analysis☆30Updated 5 years ago
- 3D hotspot mutation proximity analysis tool☆48Updated 2 years ago
- Tissue-specific variant effect predictions on splicing☆42Updated 2 years ago
- http://bam.iobio.io☆47Updated last year
- A Python package for gene network analysis☆32Updated 3 years ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆45Updated 2 years ago
- provides common tools and lookup tables used primarily by the hgvs and uta packages☆23Updated 3 weeks ago
- Python biomart API☆68Updated 2 years ago
- BaseSpace Python SDK☆37Updated 3 years ago
- Project Manager for NGS data analysis☆31Updated this week
- Linking GWAS studies to genes through cis-regulatory datasets☆39Updated 2 years ago
- ☆21Updated last month
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆70Updated 3 weeks ago
- Python API for Xena Hub☆53Updated 2 years ago
- JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes☆23Updated 8 months ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- VarFish: comprehensive DNA variant analysis for diagnostics and research☆48Updated this week
- This repository contains Jupyter Notebooks containing GATK Best Practices Workflows☆26Updated 5 years ago
- LIkelihood Ratio Interpretation of Clinical AbnormaLities☆29Updated 3 months ago
- VAPr: A Python package for NoSQL variant data storage, annotation and prioritization☆36Updated 4 years ago
- Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python☆21Updated 2 years ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆51Updated 6 years ago
- GA4GH Variation Representation Python Implementation☆60Updated this week
- Clinical interpretation of somatic mutations in cancer☆47Updated 7 months ago