GA4GH Beacon specification.
☆33Jan 25, 2023Updated 3 years ago
Alternatives and similar repositories for specification
Users that are interested in specification are comparing it to the libraries listed below
Sorting:
- Python client for GA4GH htsget protocol☆15Nov 7, 2022Updated 3 years ago
- Elixir Beacon Reference Implementation. Latest release is compliant with v1.1.0 of the specification.☆14Jun 19, 2020Updated 5 years ago
- An information model for representing variant annotations.☆27Feb 26, 2026Updated last week
- ☆13Jun 21, 2017Updated 8 years ago
- a place for GA4GH-related wiki pages☆16Aug 3, 2017Updated 8 years ago
- ☆15May 19, 2025Updated 9 months ago
- Fast Structural Variation Detection Toolbox☆19Feb 16, 2015Updated 11 years ago
- Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis☆13Sep 21, 2022Updated 3 years ago
- Use cloud technology to annotate human sequence variants in parallel.☆11Jun 4, 2021Updated 4 years ago
- lightning☆11Oct 20, 2015Updated 10 years ago
- Online material and code base for the article Coordinates and Intervals in Graph Based Reference Genomes☆11May 2, 2017Updated 8 years ago
- Companion notebooks for "Dog and human inflammatory bowel disease rely on overlapping yet distinct dysbiosis networks"☆11Jul 13, 2018Updated 7 years ago
- Models and APIs for Genomic data. RETIRED 2018-01-24☆220Oct 28, 2022Updated 3 years ago
- a web application to search and navigate the Human Phenotype Ontology (HPO)☆14Updated this week
- Semantic data model of the set of common data elements for rare disease registration☆12Oct 26, 2023Updated 2 years ago
- Metadata model and schemas for the EJP virtual platform☆18Aug 29, 2024Updated last year
- Documentation for the MatchmakerExchange APIs☆34Feb 24, 2026Updated last week
- Integrate the GA4GH schemas and probably a scala impl of the service.☆14May 20, 2016Updated 9 years ago
- robust matching of small variant datasets using flexible scoring schemes☆11Mar 26, 2020Updated 5 years ago
- LEGACY repository for SODAR Core, preserved for saving review-related issues. See "sodar-core" for the up-to-date repository.☆15Jun 1, 2022Updated 3 years ago
- Helper script for bioconductor/bioconductor_docker☆13Feb 26, 2026Updated last week
- Allele frequency filter app☆14May 4, 2022Updated 3 years ago
- Lightweight, portable variation registration and retrieval☆16Updated this week
- Recommended Graphtyper pipelines☆15Feb 22, 2021Updated 5 years ago
- Beacon of Beacons.☆14Sep 25, 2018Updated 7 years ago
- Ontology for consent codes and data use requirements☆67Sep 21, 2022Updated 3 years ago
- Simple matching of HTS samples based on HLA typing☆14Jan 4, 2017Updated 9 years ago
- Openlab - decentralised bioinformatics services - from the command line.☆20Mar 1, 2023Updated 3 years ago
- Allele frequency filtering for Mendelian variant discovery☆18Sep 27, 2016Updated 9 years ago
- Parallel Genomic Analysis Toolkit☆14Feb 11, 2019Updated 7 years ago
- Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores …☆16Aug 9, 2018Updated 7 years ago
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆99Jan 24, 2018Updated 8 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆18Mar 5, 2019Updated 7 years ago
- [DEPRECATED] - A GA4GH Task Execution Service (TES) compatible implementation for Azure Compute☆18Sep 29, 2023Updated 2 years ago
- collection of data structures and algorithms☆19Mar 19, 2019Updated 6 years ago
- Utilities for analyzing mutations and neoepitopes in patient cohorts☆20Jun 7, 2018Updated 7 years ago
- Draft of BioJS 3: Web components☆18Mar 8, 2016Updated 9 years ago
- non-redundant, compressed, journalled, file-based storage for biological sequences☆47Nov 10, 2025Updated 3 months ago
- Examples of using CloudML with genomic data.☆18May 24, 2019Updated 6 years ago