Alternatives and similar repositories for specification:

Users that are interested in specification are comparing it to the libraries listed below

• ga4gh / vrs-python
  GA4GH Variation Representation Python Implementation
  ☆53Updated this week
• ga4gh / va-spec
  An information model for representing variant annotations.
  ☆18Updated this week
• ga4gh / vrs
  Extensible specification for representing and uniquely identifying biological sequence variation
  ☆87Updated 2 weeks ago
• EBISPOT / DUO
  Ontology for consent codes and data use requirements
  ☆67Updated 2 years ago
• ohsu-comp-bio / g2p-aggregator
  Associations of genomic features, drugs and diseases
  ☆48Updated 2 years ago
• ga4gh / wiki
  a place for GA4GH-related wiki pages
  ☆16Updated 7 years ago
• EBISPOT / goci
  GWAS Catalog Ontology and Curation Infrastructure
  ☆26Updated last week
• phenopackets / phenopacket-format
  ☆26Updated 5 years ago
• ga4gh-beacon / beacon-elixir
  Elixir Beacon Reference Implementation. Latest release is compliant with v1.1.0 of the specification.
  ☆14Updated 4 years ago
• monarch-initiative / phenopacket-store
  Collections of GA4GH phenopackets that represent individuals with Mendelian diseases.
  ☆24Updated 3 weeks ago
• The-Sequence-Ontology / SO-Ontologies
  Collect of SO Ontologies
  ☆99Updated 4 months ago
• monarch-initiative / pyphetools
  Python Phenopacket Tools
  ☆16Updated 2 months ago
• biothings / myvariant.info
  MyVariant.info: A BioThings API for human variant annotations
  ☆91Updated 2 weeks ago
• TheJacksonLaboratory / LIRICAL
  LIkelihood Ratio Interpretation of Clinical AbnormaLities
  ☆26Updated 2 months ago
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆46Updated this week
• NCI-GDC / gdcdatamodel
  Translation layer between the GDC Data Dictionary and psqlgraph
  ☆28Updated last year
• NCI-GDC / gdcdictionary
  Data dictionary for the GDC
  ☆52Updated 6 months ago
• sapporo-wes / sapporo-service
  A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…
  ☆22Updated 2 months ago
• personalis / hgvslib
  hgvslib provides functions to parse and compare the equivalency of variant strings described according to Human Genome Variation Society …
  ☆18Updated 2 years ago
• KHP-Informatics / bioindocker15
  [Bio in Docker] Symposium 2015
  ☆21Updated 7 years ago
• nellore / rail
  Scalable RNA-seq analysis
  ☆73Updated 4 years ago
• biocompute-objects / BCO_Documentation
  Repository for documentation to support the IEEE 2791-2020 standard. Please see our home page for communications/publications:
  ☆16Updated 8 months ago
• biobuilds / biobuilds
  Curated collection of open-source bioinformatics tools
  ☆28Updated 6 years ago
• monarch-initiative / dipper
  Data Ingestion Pipeline for Monarch
  ☆57Updated 2 years ago
• statgenetics / seqspark
  SEQSpark documentation
  ☆18Updated 4 years ago
• openvax / varcode
  Library for manipulating genomic variants and predicting their effects
  ☆84Updated 9 months ago
• arq5x / cyvcf
  A fast Python library for VCF files leveraging Cython for speed.
  ☆52Updated 7 years ago
• macarthur-lab / omim
  Repo for downloading and storing OMIM data
  ☆18Updated 8 years ago
• monarch-initiative / monarch-disease-ontology-RETIRED
  THIS IS THE OLD REPO: Use this one instead: https://github.com/monarch-initiative/mondo-build
  ☆17Updated 4 years ago
• common-workflow-lab / wdl2cwl
  [Experimental] Workflow Definition Language (WDL) to CWL
  ☆28Updated 3 years ago