Protein-Engineering-Framework / PyPEFLinks
PyPEF – Pythonic Protein Engineering Framework
☆25Updated 4 months ago
Alternatives and similar repositories for PyPEF
Users that are interested in PyPEF are comparing it to the libraries listed below
Sorting:
- Scores for Hydrophobicity and Charges based on SASAs☆41Updated 7 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆61Updated 8 months ago
- Modelling of Large Protein Complexes☆39Updated 5 months ago
- ☆37Updated 2 years ago
- Structure prediction of alternative protein conformations☆80Updated 11 months ago
- PepFun 2.0: improved protocols for the analysis of natural and modified peptides☆27Updated 2 years ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆45Updated 3 years ago
- ☆43Updated 2 years ago
- PyDock Tutorial☆35Updated 7 years ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆86Updated 3 months ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆51Updated last week
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆38Updated 3 years ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆30Updated 4 months ago
- A Unified Approach to Protein Engineering☆41Updated last year
- Efficient manipulation of protein structures in Python☆61Updated 4 months ago
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆26Updated 8 months ago
- Some Rosetta Scripts that allow for various simple tasks☆14Updated 6 years ago
- An open-source library for the analysis of protein interactions.☆33Updated 4 years ago
- ☆56Updated 5 months ago
- Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file☆36Updated last month
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆40Updated 4 years ago
- ☆22Updated 3 years ago
- Python package to manage protein structures and their annotations☆45Updated last year
- Kuhlman Lab Installation of AlphaFold3☆38Updated 4 months ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆50Updated last year
- Explicit crosslinks in AlphaFold 3☆23Updated 10 months ago
- Scripts used for Mulligan et al. (2020): Computationally-designed peptide macrocycle inhibitors of New Delhi metallo-beta-lactamase 1☆19Updated 4 years ago
- ☆73Updated 10 months ago
- ☆47Updated last year