Protein-Engineering-Framework / PyPEFLinks
PyPEF – Pythonic Protein Engineering Framework
☆24Updated 2 weeks ago
Alternatives and similar repositories for PyPEF
Users that are interested in PyPEF are comparing it to the libraries listed below
Sorting:
- Scores for Hydrophobicity and Charges based on SASAs☆37Updated 3 months ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- PyDock Tutorial☆33Updated 7 years ago
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆26Updated 4 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆28Updated 3 weeks ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆54Updated 4 months ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 3 months ago
- Modelling of Large Protein Complexes☆37Updated 2 months ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆36Updated 2 years ago
- Kuhlman Lab Installation of AlphaFold3☆34Updated last week
- Efficient manipulation of protein structures in Python☆58Updated last week
- A Motif Hash Based Method for Matching Crosslinkers into Peptides and Proteins☆23Updated last year
- ☆35Updated 2 years ago
- ☆41Updated last year
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆28Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆66Updated 10 months ago
- ☆36Updated last year
- ☆53Updated last month
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆66Updated 2 months ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆78Updated last year
- Structure prediction of alternative protein conformations☆79Updated 7 months ago
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆81Updated 2 weeks ago
- Physical energy function for protein sequence design☆33Updated 2 years ago
- A Unified Approach to Protein Engineering☆42Updated last year
- Structure prediction and design of proteins with noncanonical amino acids☆100Updated last week
- ☆71Updated 6 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆45Updated 10 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- ☆51Updated 10 months ago