Overview of our data for microbial genomic benchmarking
☆41Jun 19, 2026Updated last month
Alternatives and similar repositories for MicroBench
Users that are interested in MicroBench are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PyO3 bindings and Python interface to skani, a method for fast genomic identity calculation using sparse chaining.☆29Aug 20, 2025Updated 11 months ago
- Host depletion optimised for clinical metagenomic sequencing applications☆19Jul 9, 2026Updated last month
- Fast DNA search and [host] depletion using minimizers☆120Updated this week
- Taxonomy classification of viral sequences / contigs☆12Jul 15, 2025Updated last year
- gemsparcl 💎✨ Rapid and consistent clustering of millions of genomes highlights the diversity of prokaryotic life☆16Jun 16, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Simple-to-use interactive comparison of two bacterial genomes☆28Jan 30, 2026Updated 6 months ago
- ☆20Jan 13, 2026Updated 6 months ago
- Plasmid analysis using rearrangement distances☆56Jul 19, 2026Updated 3 weeks ago
- Resolving Species Level Classification Using Emu☆14Jun 14, 2024Updated 2 years ago
- Embedding-based indexing for compact storage and rapid querying of bacterial pan-genomes☆22Jul 11, 2026Updated 3 weeks ago
- A new high-resolution long-read metagenome assembler for even noisy reads☆163Jul 3, 2026Updated last month
- Short-read assembler for bacterial genomics based on a de Bruijn graph written in Rust 🦅☆15Updated this week
- Rapidly extract reads from FASTX files based on taxonomic classification via Kraken2.☆15Jun 17, 2026Updated last month
- MetaMDBG: a lightweight assembler for long and accurate metagenomics reads.☆227May 9, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- MetagenOmic read Re-Assigner and abundance quantifier