brainglobe / brainglobe-registrationLinks
Registration to BrainGlobe atlases in napari using Elastix
☆22Updated this week
Alternatives and similar repositories for brainglobe-registration
Users that are interested in brainglobe-registration are comparing it to the libraries listed below
Sorting:
- Read and write files from the BrainGlobe neuroanatomy suite☆14Updated this week
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆22Updated this week
- Efficient cell detection in large images using cellfinder in napari☆23Updated last year
- How to use Aligning Big Brains and Atlases with Python☆15Updated 2 years ago
- Standalone cellfinder cell detection algorithm☆19Updated last year
- Loading and saving of image data.☆10Updated last year
- Visualise brainreg registration output☆10Updated 3 years ago
- Anatomical space conventions made easy.☆10Updated last month
- Brainways☆18Updated 2 weeks ago
- Build unbiased anatomical templates from individual images☆11Updated this week
- ☆18Updated 3 years ago
- Segmentation of anatomical structures in a common coordinate space☆33Updated this week
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Updated last year
- MultiModal Big Image Data Sharing and Exploration☆14Updated 2 years ago
- ABBA, controlled from python☆13Updated 2 months ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆41Updated this week
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆16Updated last year
- ☆18Updated 3 years ago
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 4 years ago
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆49Updated 3 months ago
- Fast, volumetric cell detection. In development.☆17Updated this week
- ☆10Updated last year
- ☆10Updated 2 years ago
- Mix-and-match computer vision tools for your animal behaviour analysis☆17Updated this week
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Updated 7 months ago
- GPU-based 3D non-rigid volumetric registration☆32Updated this week
- Napari plugin for working with video files.☆12Updated 3 weeks ago
- ☆23Updated last month
- Re-usable GitHub Action scripts☆10Updated last month
- ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing☆21Updated 2 years ago