brainglobe / brainglobe-registrationView external linksLinks
Registration to BrainGlobe atlases in napari using Elastix
☆29Updated this week
Alternatives and similar repositories for brainglobe-registration
Users that are interested in brainglobe-registration are comparing it to the libraries listed below
Sorting:
- Anatomical space conventions made easy.☆12Feb 3, 2026Updated last week
- brainglobe.info website☆13Feb 6, 2026Updated last week
- Read and write files from the BrainGlobe neuroanatomy suite☆15Feb 3, 2026Updated last week
- Build unbiased anatomical templates from individual images☆12Updated this week
- ☆11Oct 21, 2025Updated 3 months ago
- Fancier logging with python.☆16Feb 2, 2026Updated 2 weeks ago
- A package to manage electrophysiology analysis.☆22Feb 9, 2026Updated last week
- NIU website on common software problems and their troubleshooting☆10Updated this week
- General information, resources and dicussions for the BrainGlobe project.☆11Feb 21, 2025Updated 11 months ago
- Visualise brainreg registration output☆10Nov 20, 2021Updated 4 years ago
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆20Dec 16, 2025Updated last month
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Nov 26, 2020Updated 5 years ago
- Re-usable GitHub Action scripts☆14Feb 4, 2026Updated last week
- Mix-and-match computer vision tools for your animal behaviour analysis☆25Feb 3, 2026Updated last week
- Standalone cellfinder cell detection algorithm☆20Jan 3, 2024Updated 2 years ago
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆23Feb 3, 2026Updated last week
- Efficient cell detection in large images using cellfinder in napari☆22Jan 5, 2024Updated 2 years ago
- ☆10Mar 15, 2023Updated 2 years ago
- Loading and saving of image data.☆10Feb 9, 2024Updated 2 years ago
- Segmentation of anatomical structures in a common coordinate space☆35Feb 3, 2026Updated last week
- Rendering anatomical heatmaps with brainrender and matplotlib☆47Feb 3, 2026Updated last week
- Utility to create a basic Python project structure with tests, CI etc.☆36Feb 5, 2026Updated last week
- How to use Aligning Big Brains and Atlases with Python☆14May 3, 2023Updated 2 years ago
- UNRAVEL: UN-biased high-Resolution Analysis and Validation of Ensembles using Light sheet images☆13Updated this week
- Automated 3D brain registration with support for multiple species and atlases.☆144Feb 3, 2026Updated last week
- A Python package to download neuronal morphologies☆18Feb 3, 2026Updated last week
- An R toolbox for analysing movement across space and time☆10Jan 16, 2026Updated last month
- A Python interface to access neuroanatomical atlases☆172Updated this week
- ☆18Feb 10, 2022Updated 4 years ago
- Tool for the creation, validation and transfer of neuroscience project folders.☆33Feb 6, 2026Updated last week
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 3 years ago
- Space for discussion of a standardized structure (directory layout + metadata) for experimental data in systems neuroscience, similar to …☆23Apr 24, 2023Updated 2 years ago
- A repository for our participation in Google Summer of Code☆13Apr 15, 2025Updated 10 months ago
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Jan 5, 2024Updated 2 years ago
- Pose estimation scripts to be run on the SWC HPC cluster☆12Dec 5, 2023Updated 2 years ago
- Code for recreating the figures in the brainrender paper (Claudi et al. 2020)☆12Dec 11, 2020Updated 5 years ago
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆56Feb 2, 2026Updated 2 weeks ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆37Nov 24, 2023Updated 2 years ago
- Brainways☆22Aug 28, 2025Updated 5 months ago