brainglobe / brainglobe-registration
Registration to BrainGlobe atlases in napari using Elastix
☆22Updated last week
Alternatives and similar repositories for brainglobe-registration
Users that are interested in brainglobe-registration are comparing it to the libraries listed below
Sorting:
- Read and write files from the BrainGlobe neuroanatomy suite☆14Updated last week
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆22Updated last week
- Standalone cellfinder cell detection algorithm☆19Updated last year
- Efficient cell detection in large images using cellfinder in napari☆23Updated last year
- How to use Aligning Big Brains and Atlases with Python☆15Updated 2 years ago
- Visualise brainreg registration output☆10Updated 3 years ago
- Loading and saving of image data.☆10Updated last year
- Brainways☆17Updated 3 weeks ago
- Build unbiased anatomical templates from individual images☆11Updated last week
- Segmentation of anatomical structures in a common coordinate space☆32Updated last week
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Updated last year
- ☆18Updated 3 years ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆40Updated last week
- ABBA, controlled from python☆13Updated last month
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆16Updated last year
- ☆18Updated 3 years ago
- Fast, volumetric cell detection. In development.☆17Updated this week
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 4 years ago
- MultiModal Big Image Data Sharing and Exploration☆14Updated 2 years ago
- GPU-based 3D non-rigid volumetric registration☆27Updated this week
- Data processing tools for animal behavioural analysis☆17Updated last week
- Repo for CCN workshop on caiman and mesmerize in January 2023☆13Updated 2 years ago
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆49Updated 2 months ago
- General information, resources and dicussions for the BrainGlobe project.☆11Updated 2 months ago
- ☆10Updated 2 years ago
- Napari plugin for working with video files.☆12Updated last week
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 4 years ago
- ☆45Updated 4 years ago
- ☆10Updated last year
- ☆34Updated last year