djamesbarker / pMATLinks
Fiber Photometry Modular Analysis Tool Suite
☆42Updated 4 years ago
Alternatives and similar repositories for pMAT
Users that are interested in pMAT are comparing it to the libraries listed below
Sorting:
- Repository for BehaviorDEPOT pipeline app files and source code☆41Updated last month
- Registration of cells across sessions.☆76Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆81Updated 9 months ago
- Fiber photometry analysis☆23Updated last week
- A gui for browsing joint calcium imaging + behavioral data.☆55Updated last year
- ☆52Updated last year
- Free, platform independent, behavior tracking software.☆143Updated 7 months ago
- Tools to work with Allen Inst CCF data in matlab☆145Updated 6 months ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Updated 11 months ago
- A curated list of awesome Neuropixels resources.☆124Updated last month
- Histology processing☆72Updated last month
- R Scripts to analyze deep lab cut point data and related data☆71Updated 3 years ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆30Updated 2 months ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆66Updated 2 months ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆40Updated last month
- Tools to register histological section images and cell count locations to mouse brain atlas☆28Updated 3 years ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆140Updated 3 weeks ago
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated last month
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆65Updated last year
- pyqt5 dependent applications for IBL sessions☆32Updated last week
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆185Updated last week
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆73Updated 2 weeks ago
- ☆12Updated 9 years ago
- cortex lab code for electrophysiology☆85Updated 2 years ago
- Python package to handle probe layout, geometry and wiring to device.☆78Updated last week
- SpikeGLX postprocessing [tshift filter CAR fix join extract]☆15Updated 3 weeks ago
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated last year
- ☆18Updated 2 years ago
- Calcium imaging inter-session alignment☆15Updated last month