DeepLabCut / napari-deeplabcut
a napari plugin for labeling and refining keypoint data within DeepLabCut projects
☆54Updated last month
Alternatives and similar repositories for napari-deeplabcut:
Users that are interested in napari-deeplabcut are comparing it to the libraries listed below
- A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks☆80Updated last month
- Quantify user-defined behaviors.☆74Updated this week
- Repository for BehaviorDEPOT pipeline app files and source code☆36Updated 4 months ago
- ☆84Updated last week
- Rendering anatomical heatmaps with brainrender and matplotlib☆38Updated last week
- ☆19Updated last year
- Tools for machine learning of animal behavior☆13Updated 11 months ago
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆28Updated 9 months ago
- Demo code for CAPTURE and DANNCE☆27Updated 3 years ago
- Brainways☆16Updated 2 weeks ago
- Code package that allows meta analyses of unsupervised behavior results☆16Updated 6 months ago
- MoSeq2 Jupyter Notebook platform used to run all of the MoSeq2 tools in a GUI.☆34Updated last month
- Analysis code for Easy Electrophysiology (www.easyelectrophysiology.com)☆16Updated 4 months ago
- PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…☆47Updated 10 months ago
- SLEAP to Anipose triangulation pipeline for 3D multi-animal pose tracking.☆17Updated 4 months ago
- Automatic Mobility Based Behavioral Quantification ( Forced Swim Test, Tail Suspension Test )☆18Updated 4 months ago
- DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition☆42Updated this week
- A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.☆91Updated 3 months ago
- ☆34Updated last year
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆13Updated 2 years ago
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆32Updated 4 years ago
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated last month
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆20Updated this week
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆25Updated last year
- Fiber Photometry Modular Analysis Tool Suite☆36Updated 3 years ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆54Updated 9 months ago
- An active learning platform for expert-guided, data efficient discovery of behavior.☆56Updated last week
- DLC2Action is an action segmentation package that makes running and tracking of machine learning experiments easy.☆24Updated 11 months ago
- R Scripts to analyze deep lab cut point data and related data☆66Updated 2 years ago
- Live Mouse Tracker analysis☆26Updated this week