DeepLabCut / napari-deeplabcutLinks
a napari plugin for labeling and refining keypoint data within DeepLabCut projects
☆57Updated 3 weeks ago
Alternatives and similar repositories for napari-deeplabcut
Users that are interested in napari-deeplabcut are comparing it to the libraries listed below
Sorting:
- A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks☆103Updated 2 months ago
- Quantify user-defined behaviors.☆90Updated last week
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 11 months ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆44Updated 2 weeks ago
- A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.☆105Updated last month
- Anatomical space conventions made easy.☆10Updated 2 weeks ago
- An active learning platform for expert-guided, data efficient discovery of behavior.☆62Updated 3 months ago
- Fiji pipeline for automated serial section reconstruction and mouse brain analysis.☆29Updated last year
- Brainways☆21Updated 3 weeks ago
- ☆52Updated last year
- Mix-and-match computer vision tools for your animal behaviour analysis☆18Updated last week
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆69Updated last week
- ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing☆23Updated 3 years ago
- ☆96Updated last week
- Automated 3D cell detection in very large images☆217Updated 2 weeks ago
- Analysis code for Easy Electrophysiology (www.easyelectrophysiology.com)☆17Updated 5 months ago
- A Python interface to access neuroanatomical atlases☆157Updated this week
- Fiber Photometry Modular Analysis Tool Suite☆40Updated 4 years ago
- ☆45Updated 5 years ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆26Updated last year
- ☆34Updated 3 months ago
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- Build unbiased anatomical templates from individual images☆11Updated last week
- Automated 3D brain registration with support for multiple species and atlases.☆136Updated 2 weeks ago
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 7 months ago
- Efficient cell detection in large images using cellfinder in napari☆22Updated last year
- ☆19Updated last year
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆22Updated 2 weeks ago
- ☆18Updated 3 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year