DeepLabCut / napari-deeplabcutLinks
a napari plugin for labeling and refining keypoint data within DeepLabCut projects
☆59Updated last month
Alternatives and similar repositories for napari-deeplabcut
Users that are interested in napari-deeplabcut are comparing it to the libraries listed below
Sorting:
- A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks☆104Updated 3 weeks ago
- Quantify user-defined behaviors.☆96Updated 2 weeks ago
- Anatomical space conventions made easy.☆10Updated 3 weeks ago
- A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.☆106Updated 2 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last year
- Brainways☆21Updated 2 months ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆44Updated 3 weeks ago
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆69Updated last month
- Automated 3D cell detection in very large images☆219Updated 2 weeks ago
- Fiji pipeline for automated serial section reconstruction and mouse brain analysis.☆29Updated 2 years ago
- An active learning platform for expert-guided, data efficient discovery of behavior.☆63Updated 4 months ago
- ☆97Updated this week
- Mix-and-match computer vision tools for your animal behaviour analysis☆20Updated last week
- Efficient cell detection in large images using cellfinder in napari☆22Updated last year
- ☆52Updated last year
- ☆34Updated 5 months ago
- PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…☆52Updated last year
- ☆45Updated 5 years ago
- Read and write files from the BrainGlobe neuroanatomy suite☆14Updated 3 weeks ago
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 9 months ago
- ☆19Updated last year
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆26Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- A package to manage electrophysiology analysis.☆23Updated last week
- ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing☆23Updated 3 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆52Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- ☆10Updated 2 years ago
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆22Updated 3 weeks ago
- ☆18Updated 3 years ago