DeepLabCut / napari-deeplabcutLinks
a napari plugin for labeling and refining keypoint data within DeepLabCut projects
☆55Updated 5 months ago
Alternatives and similar repositories for napari-deeplabcut
Users that are interested in napari-deeplabcut are comparing it to the libraries listed below
Sorting:
- DLC2Action is an action segmentation package that makes running and tracking of machine learning experiments easy.☆25Updated last year
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 8 months ago
- A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks☆89Updated 3 months ago
- Quantify user-defined behaviors.☆77Updated this week
- ☆19Updated last year
- ☆90Updated 2 weeks ago
- An active learning platform for expert-guided, data efficient discovery of behavior.☆59Updated 2 weeks ago
- Brainways☆18Updated last month
- Code package that allows meta analyses of unsupervised behavior results☆16Updated 3 weeks ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆43Updated 2 weeks ago
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated 5 months ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆25Updated last year
- DeepLabCut based data analysis package including pose estimation and representation learning mediated behavior recognition☆44Updated this week
- R Scripts to analyze deep lab cut point data and related data☆67Updated 2 years ago
- Tools for machine learning of animal behavior☆14Updated last year
- Anatomical space conventions made easy.☆10Updated 3 weeks ago
- Fiji pipeline for automated serial section reconstruction and mouse brain analysis.☆29Updated last year
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆14Updated 3 months ago
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆29Updated last week
- ☆18Updated 3 years ago
- MoSeq2 Jupyter Notebook platform used to run all of the MoSeq2 tools in a GUI.☆34Updated 5 months ago
- ☆34Updated last month
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆28Updated 3 weeks ago
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆33Updated 4 years ago
- Fiber Photometry Modular Analysis Tool Suite☆40Updated 3 years ago
- SLEAP to Anipose triangulation pipeline for 3D multi-animal pose tracking.☆20Updated 8 months ago
- a module for kinematic analysis of deeplabcut outputs☆141Updated last year
- Automatic Mobility Based Behavioral Quantification ( Forced Swim Test, Tail Suspension Test )☆18Updated 8 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆49Updated last year