ZexinChen / AlphaTracker
AlphaTracker is a computer vision pipeline with the practical and real-time advantages , which requires minimal hardware requirements and produces reliable tracking of multiple unmarked animals. An easy-to-use user interface further enables manual inspection and curation of results.
☆69Updated last year
Alternatives and similar repositories for AlphaTracker:
Users that are interested in AlphaTracker are comparing it to the libraries listed below
- End-user version of the Mouse Action Recognition System (MARS)☆60Updated 11 months ago
- ☆30Updated 3 years ago
- An active learning platform for expert-guided, data efficient discovery of behavior.☆56Updated 2 weeks ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆54Updated last year
- Demo code for CAPTURE and DANNCE☆27Updated 3 years ago
- ☆84Updated this week
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated last month
- a module for kinematic analysis of deeplabcut outputs☆138Updated last year
- Various scripts to support deeplabcut and what to do afterwards!☆151Updated last year
- ☆102Updated last month
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆193Updated last year
- DLC2Action is an action segmentation package that makes running and tracking of machine learning experiments easy.☆24Updated 11 months ago
- [ECCV 2024] "Elucidating the Hierarchical Nature of Behavior with Masked Autoencoders"☆17Updated 2 weeks ago
- Code package that allows meta analyses of unsupervised behavior results☆16Updated 6 months ago
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆32Updated 4 years ago
- For developers and people training MARS models☆17Updated 11 months ago
- ☆17Updated last year
- R Scripts to analyze deep lab cut point data and related data☆66Updated 2 years ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆181Updated 5 months ago
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆49Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆93Updated 7 months ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆164Updated 3 months ago
- Labeling GUI for multi-camera tracking☆37Updated 5 months ago
- ☆32Updated 5 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆36Updated 5 months ago
- PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…☆47Updated 10 months ago
- quantification of behavior across chronic social defeat stress☆10Updated 2 years ago
- DeepGraphPose☆32Updated 2 years ago
- We turn natural language descriptions of behaviors into machine-executable code☆213Updated 6 months ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆13Updated 2 years ago