neuroethology / MARSView external linksLinks
End-user version of the Mouse Action Recognition System (MARS)
☆77Mar 26, 2024Updated last year
Alternatives and similar repositories for MARS
Users that are interested in MARS are comparing it to the libraries listed below
Sorting:
- For developers and people training MARS models☆19Mar 15, 2024Updated last year
- SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers☆351Updated this week
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆205Feb 9, 2024Updated 2 years ago
- Various scripts to support deeplabcut and what to do afterwards!☆161Jul 1, 2025Updated 7 months ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆199Oct 3, 2024Updated last year
- Repository for BehaviorDEPOT pipeline app files and source code☆41Jan 6, 2026Updated last month
- An open-source ecosystem of hardware and software for head-fixed behavior☆13Sep 25, 2025Updated 4 months ago
- ☆12Jun 19, 2024Updated last year
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆53Jun 1, 2025Updated 8 months ago
- Tools for machine learning of animal behavior☆15Mar 8, 2024Updated last year
- An active learning platform for expert-guided, data efficient discovery of behavior.☆66Jun 11, 2025Updated 8 months ago
- A deep learning framework for multi-animal pose tracking.☆555Updated this week
- ☆38Mar 22, 2021Updated 4 years ago
- GUI to run DeepLabCut on live video feed☆66Feb 6, 2026Updated last week
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆82Feb 6, 2026Updated last week
- We turn natural language descriptions of behaviors into machine-executable code☆232Jun 30, 2025Updated 7 months ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆185Jan 26, 2026Updated 2 weeks ago
- PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…☆52Apr 22, 2024Updated last year
- a napari plugin for labeling and refining keypoint data within DeepLabCut projects☆60Feb 6, 2026Updated last week
- a module for kinematic analysis of deeplabcut outputs☆151Dec 13, 2023Updated 2 years ago
- ☆32Jun 6, 2019Updated 6 years ago
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆35Feb 7, 2021Updated 5 years ago
- Quantify user-defined behaviors.☆103Jan 23, 2026Updated 3 weeks ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆62Jul 1, 2023Updated 2 years ago
- Animal Part Tracker☆85Feb 3, 2026Updated last week
- Acoustic camera system for measuring ultrasound communication in rodents☆22Jan 19, 2026Updated 3 weeks ago
- The release version of Social Behavior Atlas (SBeA)☆64Nov 3, 2025Updated 3 months ago
- ☆10Jun 4, 2025Updated 8 months ago
- Awesome papers for markerless animal motion capture and 3D reconstruction.☆324Updated this week
- ☆20Nov 28, 2023Updated 2 years ago
- A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.☆114Aug 18, 2025Updated 5 months ago
- Voltage imaging analysis in python☆10May 25, 2021Updated 4 years ago
- A charuco based calibrator for camera setups (intrinsic and extrinsic coordinates).☆14Feb 3, 2026Updated last week
- Analysis package for miniscope data☆14Dec 6, 2022Updated 3 years ago
- ☆29Oct 22, 2025Updated 3 months ago
- 3D reconstruction toolbox for behavior tracked with multiple cameras☆46Jun 2, 2022Updated 3 years ago
- Supervised and unsupervised techniques to decode signals from a population of neurons: the case of head-direction cells.☆12Mar 31, 2020Updated 5 years ago
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Jan 5, 2024Updated 2 years ago
- ☆52Aug 30, 2024Updated last year