End-user version of the Mouse Action Recognition System (MARS)
☆80Mar 26, 2024Updated last year
Alternatives and similar repositories for MARS
Users that are interested in MARS are comparing it to the libraries listed below
Sorting:
- For developers and people training MARS models☆19Mar 15, 2024Updated last year
- SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers☆353Updated this week
- Learning trajectory representations using self-supervision and programmatic supervision.☆87Sep 14, 2022Updated 3 years ago
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆207Feb 9, 2024Updated 2 years ago
- A gui for browsing joint calcium imaging + behavioral data.☆56Jan 22, 2025Updated last year
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆199Oct 3, 2024Updated last year
- Repository for BehaviorDEPOT pipeline app files and source code☆41Jan 6, 2026Updated 2 months ago
- AlphaTracker is a computer vision pipeline with the practical and real-time advantages , which requires minimal hardware requirements and…☆75Sep 26, 2023Updated 2 years ago
- An open-source ecosystem of hardware and software for head-fixed behavior☆13Sep 25, 2025Updated 5 months ago
- ☆12Jun 19, 2024Updated last year
- Tools for machine learning of animal behavior☆15Mar 8, 2024Updated last year
- An active learning platform for expert-guided, data efficient discovery of behavior.☆67Jun 11, 2025Updated 8 months ago
- ☆38Mar 22, 2021Updated 4 years ago
- GUI to run DeepLabCut on live video feed☆66Updated this week
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆83Updated this week
- SIPEC: the deep-learning Swiss knife for behavioral data analysis☆46Sep 2, 2024Updated last year
- We turn natural language descriptions of behaviors into machine-executable code☆233Jun 30, 2025Updated 8 months ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆185Jan 26, 2026Updated last month
- Code package that allows meta analyses of unsupervised behavior results☆19Jun 5, 2025Updated 9 months ago
- PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming…☆52Apr 22, 2024Updated last year
- a napari plugin for labeling and refining keypoint data within DeepLabCut projects☆60Feb 24, 2026Updated last week
- Fiber Photometry Modular Analysis Tool Suite☆43Jul 26, 2021Updated 4 years ago
- a module for kinematic analysis of deeplabcut outputs☆151Dec 13, 2023Updated 2 years ago
- ☆32Jun 6, 2019Updated 6 years ago
- The release version of Social Behavior Atlas (SBeA)☆64Updated this week
- Awesome papers for markerless animal motion capture and 3D reconstruction.☆326Feb 16, 2026Updated 2 weeks ago
- ☆20Nov 28, 2023Updated 2 years ago
- ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing☆24Jul 4, 2022Updated 3 years ago
- A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.☆116Aug 18, 2025Updated 6 months ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Mar 7, 2025Updated 11 months ago
- Analysis package for miniscope data☆14Dec 6, 2022Updated 3 years ago
- analysis tools for large-scale neural recordings☆17Apr 4, 2025Updated 11 months ago
- Voltage imaging analysis in python☆10May 25, 2021Updated 4 years ago
- MoSeq2 Jupyter Notebook platform used to run all of the MoSeq2 tools in a GUI.☆40Feb 18, 2026Updated 2 weeks ago
- ☆29Oct 22, 2025Updated 4 months ago
- 3D reconstruction toolbox for behavior tracked with multiple cameras☆46Jun 2, 2022Updated 3 years ago
- Supervised and unsupervised techniques to decode signals from a population of neurons: the case of head-direction cells.☆12Mar 31, 2020Updated 5 years ago
- ☆53Aug 30, 2024Updated last year
- SDK for running DeepLabCut on a live video stream☆231Feb 20, 2026Updated 2 weeks ago