ncbi-nlp / bluebertLinks
BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).
☆573Updated 2 years ago
Alternatives and similar repositories for bluebert
Users that are interested in bluebert are comparing it to the libraries listed below
Sorting:
- BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences☆594Updated last year
- BioBERT: a pre-trained biomedical language representation model for biomedical text mining☆694Updated 5 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆296Updated 3 years ago
- ☆152Updated last year
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆329Updated 3 years ago
- PyTorch Implementation of BioBERT☆332Updated 2 years ago
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)☆421Updated 2 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆168Updated 2 years ago
- Python wraper for MetaMap☆174Updated 4 years ago
- System for Medical Concept Extraction and Linking☆408Updated 11 months ago
- repository for Publicly Available Clinical BERT Embeddings☆726Updated 4 years ago
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆178Updated 3 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆149Updated last year
- ☆230Updated 7 years ago
- Medical Concept Annotation Tool☆503Updated this week
- ☆98Updated 3 years ago
- multilabel classification of EHR notes☆287Updated 4 years ago
- Pre-trained Language Model for Biomedical Question Answering☆123Updated 2 years ago
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆194Updated 2 years ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆161Updated 3 years ago
- ☆218Updated 7 months ago
- Medical Text Mining and Information Extraction with spaCy☆438Updated 2 years ago
- Tools for curating biomedical training data for large-scale language modeling☆481Updated 7 months ago
- PubMed PICO Element Detection Dataset☆57Updated 6 years ago
- BioBert Pytorch☆116Updated 2 years ago
- BERN2: an advanced neural biomedical namedentity recognition and normalization tool☆190Updated last year
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆76Updated 2 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- A project for developing transformer-based models for clinical relation extraction☆129Updated last year
- Weakly supervised medical named entity classification☆73Updated 2 years ago