ncbi-nlp / bluebertLinks
BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).
☆585Updated 2 years ago
Alternatives and similar repositories for bluebert
Users that are interested in bluebert are comparing it to the libraries listed below
Sorting:
- BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences☆609Updated 2 years ago
- BioBERT: a pre-trained biomedical language representation model for biomedical text mining☆703Updated 5 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆296Updated 3 years ago
- PyTorch Implementation of BioBERT☆348Updated 2 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆341Updated 4 years ago
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)☆434Updated 3 years ago
- ☆152Updated 2 years ago
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆177Updated 3 years ago
- repository for Publicly Available Clinical BERT Embeddings☆745Updated 5 years ago
- System for Medical Concept Extraction and Linking☆429Updated last year
- Python wraper for MetaMap☆173Updated 5 years ago
- Medical Concept Annotation Tool☆519Updated 5 months ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆178Updated 2 years ago
- ☆233Updated 8 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆153Updated 2 years ago
- multilabel classification of EHR notes☆294Updated 5 years ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆162Updated 4 years ago
- ☆101Updated 3 years ago
- Medical Text Mining and Information Extraction with spaCy☆438Updated 3 years ago
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆213Updated 2 years ago
- ☆221Updated last year
- Pre-trained Language Model for Biomedical Question Answering☆125Updated 2 years ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆76Updated 2 years ago
- Tools for curating biomedical training data for large-scale language modeling☆488Updated last year
- Weakly supervised medical named entity classification☆72Updated 3 years ago
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆29Updated 4 years ago
- Code for the emrQA question answering dataset☆152Updated 3 years ago
- Repository for student projects within biomedical text mining from Lund University☆57Updated 2 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆39Updated 5 years ago
- BERN2: an advanced neural biomedical namedentity recognition and normalization tool☆201Updated last year