facebookresearch / bio-lmLinks
We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.
☆162Updated 4 years ago
Alternatives and similar repositories for bio-lm
Users that are interested in bio-lm are comparing it to the libraries listed below
Sorting:
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆196Updated 2 years ago
- SciFive: a text-text transformer model for biomedical literature☆96Updated last year
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆170Updated 2 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆296Updated 3 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆152Updated last year
- BioELECTRA☆50Updated 3 years ago
- A project for developing transformer-based models for clinical relation extraction☆129Updated last year
- Code for the emrQA question answering dataset☆151Updated 3 years ago
- Pre-trained Language Model for Biomedical Question Answering☆123Updated 2 years ago
- auto icd coding with prompt☆49Updated last year
- ☆99Updated 3 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆80Updated 3 years ago
- Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]☆54Updated 3 years ago
- BioM-Transformers: Building Large Biomedical Language Models with BERT, ALBERT and ELECTRA☆37Updated last year
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 5 months ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆331Updated 3 years ago
- ☆91Updated 6 years ago
- Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system☆26Updated last year
- Dataset for medical question summarization introduced in the ACL 2019 paper "On the Summarization of Consumer Health Questions" (A. Ben A…☆30Updated 2 years ago
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?☆57Updated 2 years ago
- ☆67Updated 2 years ago
- PubMed PICO Element Detection Dataset☆57Updated 7 years ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆95Updated last year
- Implementation of the BLUE benchmark with Transformers.☆20Updated last year
- ☆61Updated 2 years ago
- BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.☆33Updated 5 years ago
- MedNLI - A Natural Language Inference Dataset For The Clinical Domain☆131Updated 2 years ago
- Data and models for the SciFact verification task.☆237Updated last year