allenai / scispacyLinks
A full spaCy pipeline and models for scientific/biomedical documents.
☆1,866Updated this week
Alternatives and similar repositories for scispacy
Users that are interested in scispacy are comparing it to the libraries listed below
Sorting:
- A BERT model for scientific text.☆1,633Updated 3 years ago
- BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences☆595Updated 2 years ago
- Bioinformatics'2020: BioBERT: a pre-trained biomedical language representation model for biomedical text mining☆2,120Updated 2 years ago
- BioBERT: a pre-trained biomedical language representation model for biomedical text mining☆697Updated 5 years ago
- BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).☆577Updated 2 years ago
- Library for clinical NLP with spaCy.☆590Updated 3 weeks ago
- Medical Text Mining and Information Extraction with spaCy☆440Updated 2 years ago
- System for Medical Concept Extraction and Linking☆413Updated last year
- 🛸 Use pretrained transformers like BERT, XLNet and GPT-2 in spaCy☆1,393Updated 3 months ago
- A Python Parser for PubMed Open-Access XML Subset and MEDLINE XML Dataset☆690Updated last month
- repository for Publicly Available Clinical BERT Embeddings☆733Updated 5 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆333Updated 3 years ago
- Medical Concept Annotation Tool☆508Updated last month
- 🪐 End-to-end NLP workflows from prototype to production☆1,395Updated 10 months ago
- 💥 Use the latest Stanza (StanfordNLP) research models directly in spaCy☆738Updated last year
- NLP, before and after spaCy☆2,229Updated last year
- 🍳 Recipes for the Prodigy, our fully scriptable annotation tool☆498Updated last year
- ☆218Updated 8 months ago
- Tools for curating biomedical training data for large-scale language modeling☆481Updated 8 months ago
- S2ORC: The Semantic Scholar Open Research Corpus: https://www.aclweb.org/anthology/2020.acl-main.447/☆964Updated last year
- skweak: A software toolkit for weak supervision applied to NLP tasks☆926Updated 11 months ago
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)☆425Updated 2 years ago
- Fast & easy transfer learning for NLP. Harvesting language models for the industry. Focus on Question Answering.☆1,754Updated last year
- SPECTER: Document-level Representation Learning using Citation-informed Transformers☆556Updated 2 years ago
- A collection of corpora for named entity recognition (NER) and entity recognition tasks. These annotated datasets cover a variety of lang…☆1,548Updated 2 months ago
- ✨Fast Coreference Resolution in spaCy with Neural Networks☆2,883Updated 2 years ago
- PyTorch Implementation of BioBERT☆340Updated 2 years ago
- Python wraper for MetaMap☆173Updated 5 years ago
- spaCy pipeline object for negating concepts in text☆281Updated 2 months ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆297Updated 3 years ago