NLPatVCU / medaCyLinks
Medical Text Mining and Information Extraction with spaCy
☆439Updated 3 years ago
Alternatives and similar repositories for medaCy
Users that are interested in medaCy are comparing it to the libraries listed below
Sorting:
- ☆221Updated last year
- BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).☆585Updated 2 years ago
- BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences☆608Updated 2 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆341Updated 4 years ago
- System for Medical Concept Extraction and Linking☆426Updated last year
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)☆432Updated 3 years ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆76Updated 2 years ago
- Python library for Natural Language Preprocessing (NLPre)☆191Updated 2 years ago
- Medical Concept Annotation Tool☆517Updated 5 months ago
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆177Updated 3 years ago
- Clinical Named Entity Recognition system (CliNER) is an open-source natural language processing system for named entity recognition in cl…☆233Updated 5 years ago
- Library for clinical NLP with spaCy.☆623Updated 4 months ago
- spaCy pipeline object for negating concepts in text☆282Updated 6 months ago
- A Python biomedical relation extraction package that uses a supervised approach (i.e. needs training data).☆157Updated 2 years ago
- BioBERT: a pre-trained biomedical language representation model for biomedical text mining☆703Updated 5 years ago
- ☆152Updated 2 years ago
- Python wraper for MetaMap☆173Updated 5 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆153Updated 2 years ago
- repository for Publicly Available Clinical BERT Embeddings☆744Updated 5 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆296Updated 3 years ago
- A project for developing transformer-based models for clinical relation extraction☆130Updated 2 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆178Updated 2 years ago
- Weakly supervised medical named entity classification☆72Updated 3 years ago
- Large medical text dataset curated for abbreviation disambiguation, designed for natural language understanding pre-training in the medic…☆280Updated 2 years ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆62Updated 3 years ago
- a sklearn wrapper for Google's BERT model☆301Updated 3 years ago
- NER and Relation Extraction from Electronic Health Records (EHR).☆91Updated 3 years ago
- Pre-trained Language Model for Biomedical Question Answering☆125Updated 2 years ago
- Spacy pipeline object for extracting values that correspond to a named entity (e.g., birth dates, account numbers, laboratory results)☆55Updated 3 years ago
- Medical Q&A with Deep Language Models☆572Updated 2 years ago