heyunh2015 / diseaseBERTLinks
Code and dataset of EMNLP 2020 paper "Infusing Disease Knowledge into BERT for Health Question Answering, Medical Inference and Disease Name Recognition"
☆69Updated 3 years ago
Alternatives and similar repositories for diseaseBERT
Users that are interested in diseaseBERT are comparing it to the libraries listed below
Sorting:
- Code for the paper Biomedical Event Extraction with Hierarchical Knowledge Graphs☆62Updated 2 years ago
- Generate-and-Rank Framework with Semantic Type Regularization for Biomedical Concept Normalization☆25Updated 4 years ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- A Keras implementation of the AAAI21 paper "a lightweight neural model for biomedical entity linking"☆54Updated 2 years ago
- Joint Biomedical Entity and Relation Extraction with Knowledge-Enhanced Collective Inference☆40Updated 2 years ago
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆135Updated 11 months ago
- DeepEventMine: End-to-end Neural Nested Event Extraction from Biomedical Texts☆95Updated 2 years ago
- Repository used to collect biomedical corpus on the Internet!☆35Updated 4 years ago
- A repository containing the code for the paper "Incorporating Domain Knowledge into Medical NLI using Knowledge Graphs" EMNLP 2019☆13Updated 5 years ago
- knowledge-enabled bert model papers☆50Updated 4 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆168Updated 2 years ago
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆194Updated 2 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- Relation Classification - SEMEVAL 2010 task 8 dataset☆60Updated 6 years ago
- a large-scale high-quality medical dialogue dataset☆90Updated 2 years ago
- ☆230Updated 7 years ago
- ☆24Updated 4 years ago
- code&data for MIE: A Medical Information Extractor towards Medical Dialogues, ACL 2020☆52Updated 4 years ago
- ECIR 2020 - MedLinker: Medical Entity Linking with Neural Representations and Dictionary Matching☆29Updated 2 years ago
- Source code for the EMNLP 2019 paper: "Connecting the Dots: Document-level Relation Extraction with Edge-oriented Graphs"☆149Updated 11 months ago
- Code for the emrQA question answering dataset☆151Updated 3 years ago
- Generative Biomedical Entity Linking via Knowledge Base-Guided Pre-training and Synonyms-Aware Fine-tuning [NAACL 2022]☆19Updated 2 years ago
- The depository support training and testing BERT-CNN model on three medical relation extraction corpora: BioCreative V CDR task corpus, t…☆73Updated 6 years ago
- ☆25Updated 2 years ago
- Code for the paper "Clinical Reading Comprehension: A Thorough Analysis of the emrQA Dataset" (ACL 2020)☆17Updated 5 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- BioBART: Pretraining and Evaluation of A Biomedical Generative Language Model [ACL-BioNLP 2022]☆52Updated 2 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆296Updated 3 years ago
- ☆48Updated last year
- Pytorch Implementation of our ACL 2020 Paper "Reasoning with Latent Structure Refinement for Document-Level Relation Extraction"☆128Updated 4 years ago