acadTags / Explainable-Automated-Medical-CodingLinks
Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)
☆63Updated 3 years ago
Alternatives and similar repositories for Explainable-Automated-Medical-Coding
Users that are interested in Explainable-Automated-Medical-Coding are comparing it to the libraries listed below
Sorting:
- A project for developing transformer-based models for clinical relation extraction☆130Updated 2 years ago
- ☆101Updated 3 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆155Updated 2 years ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆76Updated 2 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆80Updated 3 years ago
- Pre-trained Language Model for Biomedical Question Answering☆125Updated 2 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆39Updated 6 years ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆162Updated 4 years ago
- NER and Relation Extraction from Electronic Health Records (EHR).☆90Updated 3 years ago
- Code for the emrQA question answering dataset☆152Updated 3 years ago
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆99Updated last year
- A collection of papers on automated medical coding from free-texts☆151Updated last year
- ☆38Updated 3 years ago
- Weakly supervised medical named entity classification☆72Updated 3 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆114Updated 2 years ago
- ☆153Updated 2 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆178Updated 2 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆296Updated 4 years ago
- Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]☆54Updated 3 years ago
- Medical Question-Answering datasets prepared for the TREC 2017 LiveQA challenge (Medical Task)☆55Updated last year
- Health knowledge graph for 157 diseases and 491 symptoms, learned from >270,000 patients' data☆104Updated 5 years ago
- BioELECTRA☆50Updated 4 years ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆84Updated 8 months ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 3 years ago
- A fine-tuned BERT using EHR notes.☆14Updated 6 years ago
- PubMed PICO Element Detection Dataset☆57Updated 7 years ago
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆213Updated 2 years ago
- Rare disease identification from free-text clinical notes with ontologies and weak supervision☆32Updated 2 years ago
- multilabel classification of EHR notes☆297Updated 5 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 11 months ago