☆234Aug 15, 2017Updated 8 years ago
Alternatives and similar repositories for MTL-Bioinformatics-2016
Users that are interested in MTL-Bioinformatics-2016 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆135Jul 25, 2024Updated last year
- ☆48Aug 30, 2023Updated 2 years ago
- CollaboNet for Biomedical Named Entity Recognition☆48Feb 5, 2019Updated 7 years ago
- BioBert Pytorch☆116Dec 9, 2022Updated 3 years ago
- This repository aims to track the progress in BioNER and give a related paper list and an overview of the state-of-the-art (SOTA).☆201Feb 23, 2021Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Repository used to collect biomedical corpus on the Internet!☆35Sep 24, 2020Updated 5 years ago
- Tools for working with the S800 corpus☆12Sep 17, 2020Updated 5 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆42May 31, 2020Updated 5 years ago
- Conversion from brat-flavored standoff to CoNLL format☆62Nov 26, 2020Updated 5 years ago
- ☆77Dec 20, 2023Updated 2 years ago
- Named Entity Recognition for biomedical entities☆48Jan 11, 2023Updated 3 years ago
- ☆123May 2, 2018Updated 8 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆297Jan 12, 2022Updated 4 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆344Nov 9, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Bioinformatics'2020: BioBERT: a pre-trained biomedical language representation model for biomedical text mining☆2,198Aug 13, 2023Updated 2 years ago
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Sep 18, 2018Updated 7 years ago
- A CRF-biLSTM based Biomedical NER model in Bioinformatics 2018.☆24Jul 31, 2018Updated 7 years ago
- ☆38Nov 16, 2020Updated 5 years ago
- NCBI disease corpus - related resources☆31May 10, 2017Updated 8 years ago
- Python library for converting between BioNLP formats☆22Apr 20, 2023Updated 3 years ago
- This repository contains supplementary data, and links to the model and corpora used for the paper: Transfer learning for biomedical name…☆37Mar 5, 2019Updated 7 years ago
- Implementation of Nested Named Entity Recognition using BERT☆138Oct 29, 2021Updated 4 years ago
- Data structures and code to read/write BioC XML and Json.☆33Aug 21, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Jul 14, 2020Updated 5 years ago
- BioBERT: a pre-trained biomedical language representation model for biomedical text mining☆704Jun 2, 2020Updated 5 years ago
- ☆19Feb 15, 2023Updated 3 years ago
- BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).☆592Mar 25, 2023Updated 3 years ago
- For icibm paper☆11Feb 23, 2017Updated 9 years ago
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆176Apr 18, 2022Updated 4 years ago
- Att-ChemdNER☆111Jul 17, 2018Updated 7 years ago
- Bioinformatics'2023: Consistency Enhancement of Model Prediction on Document-level Named Entity Recognition☆13Jun 8, 2023Updated 2 years ago
- ☆22Jun 2, 2017Updated 8 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Table compiling the list of biomedically-related corpora available for named entity recognition (and some also suitable for association d…☆18Mar 15, 2018Updated 8 years ago
- COVID-19 corpus with annotated biomedical entities.☆11Jun 2, 2021Updated 4 years ago
- This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "Towa…☆15Jul 26, 2019Updated 6 years ago
- repository for Publicly Available Clinical BERT Embeddings☆763Aug 25, 2020Updated 5 years ago
- ☆13Oct 20, 2022Updated 3 years ago
- ☆101Feb 25, 2022Updated 4 years ago
- A system for normalizing disorder mentions in biomedical data.☆19Jul 27, 2015Updated 10 years ago