kexinhuang12345 / clinicalBERTLinks
ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)
☆435Updated 3 years ago
Alternatives and similar repositories for clinicalBERT
Users that are interested in clinicalBERT are comparing it to the libraries listed below
Sorting:
- repository for Publicly Available Clinical BERT Embeddings☆749Updated 5 years ago
- multilabel classification of EHR notes☆294Updated 5 years ago
- BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).☆585Updated 2 years ago
- Med-BERT, contextualized embedding model for structured EHR data☆312Updated last year
- BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences☆609Updated 2 years ago
- Blog post on Medium☆50Updated 3 years ago
- Medical Concept Annotation Tool☆519Updated 5 months ago
- System for Medical Concept Extraction and Linking☆430Updated last year
- A collection of papers on automated medical coding from free-texts☆150Updated last year
- ☆152Updated 2 years ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆76Updated 2 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆153Updated 2 years ago
- ☆221Updated last year
- PyTorch Implementation of BioBERT☆348Updated 2 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆296Updated 4 years ago
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆98Updated last year
- Predicting ICD Codes from Clinical Notes☆64Updated 5 years ago
- High-performance tool for negation and uncertainty detection in radiology reports☆164Updated 2 years ago
- BioBERT: a pre-trained biomedical language representation model for biomedical text mining☆704Updated 5 years ago
- ☆101Updated 3 years ago
- ☆70Updated 4 years ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆99Updated 6 months ago
- Curated list of awesome papers for electronic health records(EHR) mining, machine learning, and deep learning.☆424Updated 3 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆342Updated 4 years ago
- ☆18Updated last year
- Medical Text Mining and Information Extraction with spaCy☆438Updated 3 years ago
- Python wraper for MetaMap☆173Updated 5 years ago
- PLM-ICD: Automatic ICD Coding with Pretrained Language Models☆76Updated 2 years ago
- Code for BEHRT: Transformer for Electronic Health Records☆119Updated 2 years ago
- Library for clinical NLP with spaCy.☆627Updated 5 months ago