kexinhuang12345 / clinicalBERTLinks
ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)
☆427Updated 3 years ago
Alternatives and similar repositories for clinicalBERT
Users that are interested in clinicalBERT are comparing it to the libraries listed below
Sorting:
- repository for Publicly Available Clinical BERT Embeddings☆735Updated 5 years ago
- multilabel classification of EHR notes☆290Updated 5 years ago
- Med-BERT, contextualized embedding model for structured EHR data☆307Updated last year
- BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).☆581Updated 2 years ago
- Medical Concept Annotation Tool☆511Updated 3 months ago
- System for Medical Concept Extraction and Linking☆419Updated last year
- BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences☆602Updated 2 years ago
- Blog post on Medium☆49Updated 3 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆154Updated 2 years ago
- ☆220Updated 10 months ago
- A collection of papers on automated medical coding from free-texts☆148Updated 10 months ago
- BioBERT: a pre-trained biomedical language representation model for biomedical text mining☆699Updated 5 years ago
- ☆152Updated last year
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆77Updated 2 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆297Updated 3 years ago
- ☆100Updated 3 years ago
- Curated list of awesome papers for electronic health records(EHR) mining, machine learning, and deep learning.☆424Updated 3 years ago
- PyTorch Implementation of BioBERT☆341Updated 2 years ago
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆95Updated last year
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆96Updated 4 months ago
- Predicting ICD Codes from Clinical Notes☆63Updated 5 years ago
- High-performance tool for negation and uncertainty detection in radiology reports☆163Updated 2 years ago
- Medical Text Mining and Information Extraction with spaCy☆439Updated 2 years ago
- source codes based on PyTorch to analyze EHR☆147Updated last year
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆336Updated 3 years ago
- ☆70Updated 4 years ago
- Python wraper for MetaMap☆173Updated 5 years ago
- Library for clinical NLP with spaCy.☆606Updated 2 months ago
- Large medical text dataset curated for abbreviation disambiguation, designed for natural language understanding pre-training in the medic…☆279Updated 2 years ago
- Code for BEHRT: Transformer for Electronic Health Records☆116Updated 2 years ago