kexinhuang12345 / clinicalBERT
ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)
☆415Updated 2 years ago
Alternatives and similar repositories for clinicalBERT:
Users that are interested in clinicalBERT are comparing it to the libraries listed below
- repository for Publicly Available Clinical BERT Embeddings☆714Updated 4 years ago
- BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).☆571Updated 2 years ago
- Blog post on Medium☆49Updated 2 years ago
- multilabel classification of EHR notes☆286Updated 4 years ago
- Med-BERT, contextualized embedding model for structured EHR data☆283Updated last year
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆294Updated 3 years ago
- ☆152Updated last year
- System for Medical Concept Extraction and Linking☆401Updated 8 months ago
- BioBERT: a pre-trained biomedical language representation model for biomedical text mining☆687Updated 4 years ago
- PyTorch Implementation of BioBERT☆326Updated last year
- BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences☆592Updated last year
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆147Updated last year
- High-performance tool for negation and uncertainty detection in radiology reports☆162Updated last year
- ☆98Updated 3 years ago
- Medical Concept Annotation Tool☆487Updated last week
- Predicting ICD Codes from Clinical Notes☆61Updated 4 years ago
- ☆222Updated 3 years ago
- ☆216Updated 4 months ago
- ☆70Updated 3 years ago
- all scripts used in gatortron project☆116Updated last year
- Code for AMIA CRI 2016 paper "Learning Low-Dimensional Representations of Medical Concepts"☆247Updated 4 years ago
- source codes based on PyTorch to analyze EHR☆136Updated last year
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆74Updated 2 years ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆92Updated 10 months ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆326Updated 3 years ago
- A collection of papers on automated medical coding from free-texts☆139Updated 4 months ago
- Python wraper for MetaMap☆171Updated 4 years ago
- Multimodal Question Answering in the Medical Domain: A summary of Existing Datasets and Systems☆290Updated last year
- Large medical text dataset curated for abbreviation disambiguation, designed for natural language understanding pre-training in the medic…☆270Updated last year
- Medical Question Answering Dataset of 47,457 QA pairs created from 12 NIH websites☆387Updated last year