sy-wada / blue_benchmark_with_transformers
Implementation of the BLUE benchmark with Transformers.
☆20Updated last year
Alternatives and similar repositories for blue_benchmark_with_transformers
Users that are interested in blue_benchmark_with_transformers are comparing it to the libraries listed below
Sorting:
- BioELECTRA☆50Updated 3 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- ☆25Updated 2 years ago
- ECIR 2020 - MedLinker: Medical Entity Linking with Neural Representations and Dictionary Matching☆29Updated last year
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago
- BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.☆33Updated 5 years ago
- Pre-trained Language Model for Biomedical Question Answering☆122Updated 2 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆42Updated 4 years ago
- Multitask Learning with Pretrained Transformers☆40Updated 4 years ago
- ☆67Updated 2 years ago
- ☆38Updated 3 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 2 months ago
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Updated 6 years ago
- This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "End-…☆91Updated 5 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆165Updated last year
- A project for developing transformer-based models for clinical relation extraction☆127Updated last year
- ☆90Updated 5 years ago
- Framework for weakly supervised deep sequence taggers, focused on named entity recognition☆78Updated 2 years ago
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?☆57Updated 2 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆39Updated 5 years ago
- Dataset for medical question summarization introduced in the ACL 2019 paper "On the Summarization of Consumer Health Questions" (A. Ben A…☆30Updated 2 years ago
- A Label Attention Model for ICD Coding from Clinical Text☆69Updated 2 years ago
- Dataset for the NLPMC @ NAACL 2021 Paper: Assertion Detection in Clinical Notes: Medical Language Models to the Rescue?☆15Updated 3 years ago
- ☆35Updated 4 years ago
- Conversion from brat-flavored standoff to CoNLL format☆51Updated 4 years ago
- Challenge on Textual Inference and Question Entailment in the Medical Domain https://sites.google.com/view/mediqa2019☆51Updated 2 years ago
- Fast and Effective Biomedical Entity Linking Using a Dual Encoder☆19Updated 3 years ago
- Entity Linking & discovery solution. Agarwal et al., "Entity Linking via Explicit Mention-Mention Coreference Modeling", NAACL 2022.☆27Updated last year
- Code for the emrQA question answering dataset☆148Updated 3 years ago
- Python library for converting between BioNLP formats☆21Updated 2 years ago