BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks
☆41May 31, 2020Updated 6 years ago
Alternatives and similar repositories for BioFLAIR
Users that are interested in BioFLAIR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Aug 14, 2020Updated 6 years ago
- ☆236Aug 15, 2017Updated 9 years ago
- BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.☆32Dec 3, 2019Updated 6 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆297Jan 12, 2022Updated 4 years ago
- A CRF-biLSTM based Biomedical NER model in Bioinformatics 2018.☆24Jul 31, 2018Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- For icibm paper☆11Feb 23, 2017Updated 9 years ago
- This is the open source repository of my Recursive Neural Network for the BioCreative 6 track5 - chemprot task.☆11Feb 22, 2019Updated 7 years ago
- Python library for working with BioC files☆13Mar 28, 2018Updated 8 years ago
- BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).☆599Mar 25, 2023Updated 3 years ago
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆177Apr 18, 2022Updated 4 years ago
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆37Sep 18, 2018Updated 7 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Jul 14, 2020Updated 6 years ago
- ☆14May 22, 2023Updated 3 years ago
- Tools for working with the S800 corpus☆12Sep 17, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Github repo for the Evaluation of ChatGPT Family of Models for Biomedical Reasoning and Classification, code and data | Paper: https://ar…☆14Apr 6, 2023Updated 3 years ago
- Bi-LSTM - CRF Named Entity Recognition model for Korean (Keras)☆16Feb 7, 2018Updated 8 years ago
- NERO-nlp is a PyPI package for biomedical Named Entity (Recognition) Ontology☆12Oct 1, 2020Updated 5 years ago
- ☆12Mar 20, 2020Updated 6 years ago
- ☆39Nov 16, 2020Updated 5 years ago
- BioBert Pytorch☆116Dec 9, 2022Updated 3 years ago
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆23May 11, 2020Updated 6 years ago
- CollaboNet for Biomedical Named Entity Recognition☆48Feb 5, 2019Updated 7 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆186Jul 7, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆346Nov 9, 2021Updated 4 years ago
- ☆13Oct 20, 2022Updated 3 years ago
- Medical Similarity Dataset creation from SNOMED☆29Jul 14, 2022Updated 4 years ago
- COVID-19 corpus with annotated biomedical entities.☆11Jun 2, 2021Updated 5 years ago
- Information extraction from brain radiology reports☆10Mar 31, 2024Updated 2 years ago
- Data structures and code to read/write BioC XML and Json.☆34Aug 21, 2023Updated 3 years ago
- Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)☆33Apr 6, 2019Updated 7 years ago
- init☆13Dec 4, 2024Updated last year
- ☆11Jul 15, 2020Updated 6 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Conversion from brat-flavored standoff to CoNLL format☆69Nov 26, 2020Updated 5 years ago
- ☆14Apr 23, 2025Updated last year
- ☆12Sep 4, 2019Updated 6 years ago
- BERT models pretrained on the CORD-19 Kaggle dataset☆15Jun 8, 2020Updated 6 years ago
- Entity Linking & discovery solution. Agarwal et al., "Entity Linking via Explicit Mention-Mention Coreference Modeling", NAACL 2022.☆29Apr 11, 2024Updated 2 years ago
- ☆124May 2, 2018Updated 8 years ago
- Label shift estimation for transfer difficulty with Familiarity.☆10Feb 4, 2025Updated last year