shreyashub / BioFLAIRLinks
BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks
☆42Updated 5 years ago
Alternatives and similar repositories for BioFLAIR
Users that are interested in BioFLAIR are comparing it to the libraries listed below
Sorting:
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- Named Entity Recognition for biomedical entities☆48Updated 2 years ago
- CollaboNet for Biomedical Named Entity Recognition☆48Updated 6 years ago
- BioBert Pytorch☆116Updated 2 years ago
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Updated 7 years ago
- Pre-trained Language Model for Biomedical Question Answering☆124Updated 2 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆173Updated 2 years ago
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆136Updated last year
- BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.☆33Updated 5 years ago
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆65Updated 4 years ago
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆177Updated 3 years ago
- BioELECTRA☆50Updated 3 years ago
- Abbreviation definition dection library trained on PubMed abstracts☆49Updated 5 years ago
- Repository used to collect biomedical corpus on the Internet!☆35Updated 5 years ago
- ☆93Updated 6 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Updated 5 years ago
- Framework for weakly supervised deep sequence taggers, focused on named entity recognition☆78Updated 2 years ago
- Code for the emrQA question answering dataset☆149Updated 3 years ago
- Clinical Concept Extraction with Contextual Word Embedding☆40Updated 5 years ago
- Machine reading comprehension on clinical case reports☆149Updated last month
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆297Updated 3 years ago
- Fast and Effective Biomedical Entity Linking Using a Dual Encoder☆19Updated 3 years ago
- Conversion from brat-flavored standoff to CoNLL format☆55Updated 4 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- Crowdsourced ground truth for medical relation extraction.☆69Updated 6 years ago
- MedNLI - A Natural Language Inference Dataset For The Clinical Domain☆131Updated 2 years ago
- A project for developing transformer-based models for clinical relation extraction☆130Updated 2 years ago
- Code and supplementary material for the HealthINF conference paper☆13Updated 4 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 7 months ago
- Multitask Learning with Pretrained Transformers☆40Updated 4 years ago