CollaboNet for Biomedical Named Entity Recognition
☆48Feb 5, 2019Updated 7 years ago
Alternatives and similar repositories for CollaboNet
Users that are interested in CollaboNet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆177Apr 18, 2022Updated 4 years ago
- Sequence Tagging for Biomedical Extractive Question Answering (Bioinformatics'2020)☆10Jul 3, 2023Updated 3 years ago
- ☆237Aug 15, 2017Updated 9 years ago
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆136Jul 25, 2024Updated 2 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆297Jan 12, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆27Nov 30, 2023Updated 2 years ago
- EMNLP 2022: Biomedical NER for the Enterprise with Distillated BERN2 and the Kazu Framework☆11Aug 29, 2024Updated 2 years ago
- ☆48Aug 30, 2023Updated 3 years ago
- Predicting Multiple Demographic Attributes with Task Specific Embedding Transformation and Attention Network☆19May 25, 2020Updated 6 years ago
- Code for the paper "On the Importance of Feature Decorrelation for Unsupervised Representation Learning for RL" (ICML 2023)☆12Jun 13, 2023Updated 3 years ago
- Text mining for pharmacogenomic associations for PharmGKB☆28Nov 4, 2022Updated 3 years ago
- This repository aims to track the progress in BioNER and give a related paper list and an overview of the state-of-the-art (SOTA).☆201Feb 23, 2021Updated 5 years ago
- ☆82Oct 1, 2026Updated last week
- [NAACL 2025] Rationale-Guided Retrieval Augmented Generation for Medical Question Answering☆40Jul 15, 2026Updated 2 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Pre-trained Language Model for Biomedical Question Answering☆126Mar 24, 2023Updated 3 years ago
- [ISMB 2024] Self-BioRAG: Improving Medical Reasoning through Retrieval and Self-Reflection with Retrieval-Augmented Large Language Models☆64Apr 4, 2024Updated 2 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆41May 31, 2020Updated 6 years ago
- ASOU is acronym for Another yet Service Orchestration Utility.☆16Feb 21, 2024Updated 2 years ago
- BioBert Pytorch☆116Dec 9, 2022Updated 3 years ago
- Analysis code for knowledge discovery project☆12Sep 25, 2018Updated 8 years ago
- MIC-CIS entry in PharmaCoNER, Bacteria Biotope (BB 2029) & SeeDev 2019 Shared Tasks in EMNLP '19☆11Feb 22, 2020Updated 6 years ago
- Tools for working with PubMed data.☆15Sep 26, 2020Updated 6 years ago
- Text mining tool to retrieve protein-protein interactions from the scientific literature.☆13Jun 9, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆10May 5, 2018Updated 8 years ago
- BlueBERT, pre-trained on PubMed abstracts and clinical notes (MIMIC-III).☆600Mar 25, 2023Updated 3 years ago
- This repo is used to release code that is generated by the AI Horizons Network as needed to supplement conference papers and workshops.☆18Jun 21, 2022Updated 4 years ago
- ☆26Sep 24, 2017Updated 9 years ago
- Findings of ACL'2023: Optimizing Test-Time Query Representations for Dense Retrieval☆30Oct 24, 2023Updated 2 years ago
- ☆39Nov 16, 2020Updated 5 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆114Feb 10, 2023Updated 3 years ago
- Table compiling the list of biomedically-related corpora available for named entity recognition (and some also suitable for association d…☆18Mar 15, 2018Updated 8 years ago
- Code for the paper "DraftRec: Personalized Draft Recommendation for Winning in Multi-Player Online Battle Arena Games" (WWW 2022)☆18Aug 11, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Repository used to collect biomedical corpus on the Internet!☆35Sep 24, 2020Updated 6 years ago
- Code for the paper "PLASTIC: Improving Input and Label Plasticity for Sample Efficient Reinforcement Learning" (NeurIPS 2023)☆23Dec 8, 2023Updated 2 years ago
- OLAPH: Improving Factuality in Biomedical Long-form Question Answering☆37Sep 10, 2024Updated 2 years ago
- Tool that converts between BioC XML files and BioC JSON files☆19Jan 10, 2017Updated 9 years ago
- Python library for work with BioCreative files☆13Mar 28, 2018Updated 8 years ago
- 使用BERT-BiLSTM+CRF进行ner任务（pytorch_lightning版）☆46Dec 16, 2022Updated 3 years ago
- FaVIQ: Fact Verification from Information-seeking Questions☆43Nov 23, 2022Updated 3 years ago