wonjininfo / CollaboNet
CollaboNet for Biomedical Named Entity Recognition
☆48Updated 5 years ago
Related projects: ⓘ
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆37Updated 6 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆41Updated 4 years ago
- ☆48Updated last year
- A system for normalizing disorder mentions in biomedical data.☆19Updated 9 years ago
- Repository used to collect biomedical corpus on the Internet!☆31Updated 3 years ago
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆132Updated last month
- BioBert Pytorch☆116Updated last year
- This repository contains supplementary data, and links to the model and corpora used for the paper: Transfer learning for biomedical name…☆36Updated 5 years ago
- Named Entity Recognition for biomedical entities☆47Updated last year
- Relation Extraction with Semeval 2010 data, i2b2 2010 VA challenge classification data and DDI extraction data.☆19Updated 5 years ago
- ☆33Updated 3 years ago
- Pre-trained Language Model for Biomedical Question Answering☆122Updated last year
- Challenge on Textual Inference and Question Entailment in the Medical Domain https://sites.google.com/view/mediqa2019☆51Updated last year
- BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.☆33Updated 4 years ago
- Clinical Concept Extraction with Contextual Word Embedding☆39Updated 4 years ago
- ☆218Updated 7 years ago
- Tools for working with the S800 corpus☆10Updated 4 years ago
- BioELECTRA☆51Updated 2 years ago
- Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)☆32Updated 5 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆160Updated last year
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆19Updated last year
- ECIR 2020 - MedLinker: Medical Entity Linking with Neural Representations and Dictionary Matching☆29Updated last year
- Experiment on NER task using Huggingface state-of-the-art Transformers Natural Language Models library☆39Updated last year
- NCBI disease corpus - related resources☆24Updated 7 years ago
- Implementation of the BLUE benchmark with Transformers.☆20Updated 7 months ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆26Updated 9 months ago
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆173Updated 2 years ago
- This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "End-…☆91Updated 4 years ago
- ☆69Updated 8 months ago
- covidAsk: Answering Questions on COVID-19 in Real-Time☆64Updated last year